RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 GPATCH2LQ9NWQ4 482 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 SYBUQ9NX95 663 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 CD300AQ9UGN4 299 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 HMGXB4Q9UGU5 601 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 HCFC2Q9Y5Z7 792 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 MYO18AQ92614 2054 aaKnown RBP10.38□□□□□ -0.75
UPF3B-201ENST00000276201 TARM1B6A8C7 271 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 HTRA2O43464 458 aaPredicted RBP10.38□□□□□ -0.75
UPF3B-201ENST00000276201 EPCAMP16422 314 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 RPL17P18621 184 aaKnown RBP10.38□□□□□ -0.75
UPF3B-201ENST00000276201 MYF6P23409 242 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 ATP4BP51164 291 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 PSMD7P51665 324 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 CDH8P55286 799 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 PSME3P61289 254 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 PFKPQ01813 784 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 STX5Q13190 355 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 AAK1Q2M2I8 961 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 ZNF829Q3KNS6 432 aaPredicted RBP10.38□□□□□ -0.75
UPF3B-201ENST00000276201 PPM1LQ5SGD2 360 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 IL23RQ5VWK5 629 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 C9orf57Q5W0N0 161 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 FAM45BPQ6NSW5 357 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 SLC26A9Q7LBE3 791 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 STRADAQ7RTN6 431 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 GPR141Q7Z602 305 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 GALNT4Q8N4A0 578 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.38□□□□□ -0.75
UPF3B-201ENST00000276201 FAM45AQ8TCE6 357 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 STYXQ8WUJ0 223 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 TFAP2CQ92754 450 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 ZUFSPQ96AP4 578 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 COX4I2Q96KJ9 171 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 SUSD3Q96L08 255 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 HEXIM2Q96MH2 286 aaKnown RBP10.38□□□□□ -0.75
UPF3B-201ENST00000276201 KCTD15Q96SI1 283 aaPredicted RBP10.38□□□□□ -0.75
UPF3B-201ENST00000276201 OXCT2Q9BYC2 517 aaPredicted RBP10.38□□□□□ -0.75
UPF3B-201ENST00000276201 CASS4Q9NQ75 786 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 MAN1C1Q9NR34 630 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 TBC1D23Q9NUY8 699 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 PCDHGA7Q9Y5G6 932 aa10.38□□□□□ -0.75
UPF3B-201ENST00000276201 AP3B1O00203 1094 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 C2P06681 752 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 MPSTP25325 297 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 CLCN4P51793 760 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 DNAJB13P59910 316 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 GRSF1Q12849 480 aaKnown RBP eCLIP10.37□□□□□ -0.75
UPF3B-201ENST00000276201 PTK2BQ14289 1009 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 PDK1Q15118 436 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 PSMD5Q16401 504 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 FSTL4Q6MZW2 842 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 SCYL2Q6P3W7 929 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 CASC4Q6P4E1 433 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 ANKRD52Q8NB46 1076 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 ABTB1Q969K4 478 aaPredicted RBP10.37□□□□□ -0.75
UPF3B-201ENST00000276201 PBXIP1Q96AQ6 731 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 ISOC1Q96CN7 298 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 GPR22Q99680 433 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 TDRD1Q9BXT4 1180 aaKnown RBP10.37□□□□□ -0.75
UPF3B-201ENST00000276201 ACE2Q9BYF1 805 aaPredicted RBP10.37□□□□□ -0.75
UPF3B-201ENST00000276201 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.37□□□□□ -0.75
UPF3B-201ENST00000276201 DUS2Q9NX74 493 aaKnown RBP10.37□□□□□ -0.75
UPF3B-201ENST00000276201 DPP3Q9NY33 737 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.37□□□□□ -0.75
UPF3B-201ENST00000276201 FNIP2Q9P278 1114 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 SLC17A6Q9P2U8 582 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 CD207Q9UJ71 328 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 TSPAN16Q9UKR8 245 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 AP4E1Q9UPM8 1137 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 B3GNT3Q9Y2A9 372 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 PLXNA3P51805 1871 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 ZCWPW2A0A1B0GU75 182 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 PIRO00625 290 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 SPTLC1O15269 473 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 ADAM12O43184 909 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 PIGNO95427 931 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 INHBBP09529 407 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 BMP1P13497 986 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 ENO3P13929 434 aaPredicted RBP10.37□□□□□ -0.75
UPF3B-201ENST00000276201 DCKP27707 260 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 NPY2RP49146 381 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 NDST2P52849 883 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 PKNOX1P55347 436 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 ZBTB17Q13105 803 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 LRP8Q14114 963 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 SQLEQ14534 574 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 PAFAH1B3Q15102 231 aaKnown RBP10.37□□□□□ -0.75
UPF3B-201ENST00000276201 CDO1Q16878 200 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 ANO4Q32M45 955 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 ARHGAP17Q68EM7 881 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 ANKRD54Q6NXT1 300 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 ELMSAN1Q6PJG2 1045 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 STRA8Q7Z7C7 330 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 UBA3Q8TBC4 463 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 SLC35F5Q8WV83 523 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 CASP10Q92851 521 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 HSPBAP1Q96EW2 488 aa10.37□□□□□ -0.75
UPF3B-201ENST00000276201 PIWIL1Q96J94 861 aaKnown RBP10.37□□□□□ -0.75
UPF3B-201ENST00000276201 FCRL3Q96P31 734 aaPredicted RBP10.37□□□□□ -0.75
UPF3B-201ENST00000276201 AGAP3Q96P47 875 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms