RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 PIGWQ7Z7B1 504 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 CPLX4Q7Z7G2 160 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 C12orf40Q86WS4 652 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 OR4K2Q8NGD2 314 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 FRS2Q8WU20 508 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 ZNF75CPQ92670 426 aaPredicted RBP16.4■□□□□ 0.22
TPM1-201ENST00000267996 E2F7Q96AV8 911 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 FAM107BQ9H098 131 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 PRO3102Q9H379 93 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 SUDS3Q9H7L9 328 aaPredicted RBP16.4■□□□□ 0.22
TPM1-201ENST00000267996 CAB39LQ9H9S4 337 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 EMCNQ9ULC0 261 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 SLC39A10Q9ULF5 831 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 A0A096LPK6 155 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 A0A0J9YYE9 177 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 OR51F1A6NGY5 319 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 H7C0S8 307 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 CD3EAPO15446 510 aaKnown RBP16.4■□□□□ 0.22
TPM1-201ENST00000267996 TULP3O75386 442 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 POP4O95707 220 aaKnown RBP16.4■□□□□ 0.22
TPM1-201ENST00000267996 TOP3BO95985 862 aaKnown RBP16.4■□□□□ 0.22
TPM1-201ENST00000267996 TRBC1P01850 177 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 ASLP04424 464 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 OGNP20774 298 aaKnown RBP16.4■□□□□ 0.22
TPM1-201ENST00000267996 CLCN5P51795 746 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 CCNHP51946 323 aaPredicted RBP16.4■□□□□ 0.22
TPM1-201ENST00000267996 EPHB1P54762 984 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 TMPRSS15P98073 1019 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 DMTNQ08495 405 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 FCHO2Q0JRZ9 810 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 PTPRRQ15256 657 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 ZKSCAN8Q15776 578 aaPredicted RBP16.4■□□□□ 0.22
TPM1-201ENST00000267996 ATAT1Q5SQI0 421 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 MRNIPQ6NTE8 343 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 CNSTQ6PJW8 725 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 OR4L1Q8NH43 312 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 ZFYVE19Q96K21 471 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 EBF3Q9H4W6 596 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 ZNF576Q9H609 170 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 ZFP14Q9HCL3 533 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 HPS4Q9NQG7 708 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 FBXO6Q9NRD1 293 aaPredicted RBP16.4■□□□□ 0.22
TPM1-201ENST00000267996 THG1LQ9NWX6 298 aaKnown RBP16.4■□□□□ 0.22
TPM1-201ENST00000267996 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.4■□□□□ 0.22
TPM1-201ENST00000267996 PPIL1Q9Y3C6 166 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 ZNF711Q9Y462 761 aa16.4■□□□□ 0.22
TPM1-201ENST00000267996 FAM95CA0A1B0GW59 222 aa16.39■□□□□ 0.21
TPM1-201ENST00000267996 OTOL1A6NHN0 477 aaPredicted RBP16.39■□□□□ 0.21
TPM1-201ENST00000267996 PLIN3O60664 434 aa16.39■□□□□ 0.21
TPM1-201ENST00000267996 SRPRAP08240 638 aaKnown RBP16.39■□□□□ 0.21
TPM1-201ENST00000267996 POU4F1Q01851 419 aa16.39■□□□□ 0.21
TPM1-201ENST00000267996 USP10Q14694 798 aaKnown RBP16.39■□□□□ 0.21
TPM1-201ENST00000267996 DBN1Q16643 649 aa16.39■□□□□ 0.21
TPM1-201ENST00000267996 CDKN3Q16667 212 aa16.39■□□□□ 0.21
TPM1-201ENST00000267996 CTC1Q2NKJ3 1217 aa16.39■□□□□ 0.21
TPM1-201ENST00000267996 TYSND1Q2T9J0 566 aa16.39■□□□□ 0.21
TPM1-201ENST00000267996 ZNF789Q5FWF6 425 aa16.39■□□□□ 0.21
TPM1-201ENST00000267996 AFTPHQ6ULP2 937 aa16.39■□□□□ 0.21
TPM1-201ENST00000267996 VITQ6UXI7 678 aa16.39■□□□□ 0.21
TPM1-201ENST00000267996 DPY19L3Q6ZPD9 716 aa16.39■□□□□ 0.21
TPM1-201ENST00000267996 LCA5Q86VQ0 697 aa16.39■□□□□ 0.21
TPM1-201ENST00000267996 ZSWIM9Q86XI8 627 aa16.39■□□□□ 0.21
TPM1-201ENST00000267996 SLC41A1Q8IVJ1 513 aa16.39■□□□□ 0.21
TPM1-201ENST00000267996 RYBPQ8N488 228 aaPredicted RBP16.39■□□□□ 0.21
TPM1-201ENST00000267996 ARMC2Q8NEN0 867 aa16.39■□□□□ 0.21
TPM1-201ENST00000267996 LRRC8CQ8TDW0 803 aa16.39■□□□□ 0.21
TPM1-201ENST00000267996 ZNF641Q96N77 438 aaPredicted RBP16.39■□□□□ 0.21
TPM1-201ENST00000267996 LYSMD1Q96S90 227 aa16.39■□□□□ 0.21
TPM1-201ENST00000267996 MYADMQ96S97 322 aa16.39■□□□□ 0.21
TPM1-201ENST00000267996 NSRP1Q9H0G5 558 aaKnown RBP16.39■□□□□ 0.21
TPM1-201ENST00000267996 SUV39H2Q9H5I1 410 aa16.39■□□□□ 0.21
TPM1-201ENST00000267996 ECT2Q9H8V3 914 aa16.39■□□□□ 0.21
TPM1-201ENST00000267996 CATSPERZQ9NTU4 200 aa16.39■□□□□ 0.21
TPM1-201ENST00000267996 POLR3BQ9NW08 1133 aaPredicted RBP16.39■□□□□ 0.21
TPM1-201ENST00000267996 IL17CQ9P0M4 197 aa16.39■□□□□ 0.21
TPM1-201ENST00000267996 ANKRD6Q9Y2G4 727 aa16.39■□□□□ 0.21
TPM1-201ENST00000267996 BIRC5O15392 142 aa16.38■□□□□ 0.21
TPM1-201ENST00000267996 DLDP09622 509 aaKnown RBP16.38■□□□□ 0.21
TPM1-201ENST00000267996 CRABP2P29373 138 aa16.38■□□□□ 0.21
TPM1-201ENST00000267996 HMGCLP35914 325 aa16.38■□□□□ 0.21
TPM1-201ENST00000267996 SEMA3AQ14563 771 aa16.38■□□□□ 0.21
TPM1-201ENST00000267996 ACCSLQ4AC99 568 aa16.38■□□□□ 0.21
TPM1-201ENST00000267996 N4BP2L1Q5TBK1 243 aaPredicted RBP16.38■□□□□ 0.21
TPM1-201ENST00000267996 Q6ZVU0 165 aa16.38■□□□□ 0.21
TPM1-201ENST00000267996 PLD6Q8N2A8 252 aaKnown RBP16.38■□□□□ 0.21
TPM1-201ENST00000267996 OR2A12Q8NGT7 310 aa16.38■□□□□ 0.21
TPM1-201ENST00000267996 CYB5D2Q8WUJ1 264 aa16.38■□□□□ 0.21
TPM1-201ENST00000267996 MYLIPQ8WY64 445 aa16.38■□□□□ 0.21
TPM1-201ENST00000267996 EID2BQ96D98 161 aa16.38■□□□□ 0.21
TPM1-201ENST00000267996 OMDQ99983 421 aa16.38■□□□□ 0.21
TPM1-201ENST00000267996 C1QTNF1Q9BXJ1 281 aa16.38■□□□□ 0.21
TPM1-201ENST00000267996 FGFR1OP2Q9NVK5 253 aa16.38■□□□□ 0.21
TPM1-201ENST00000267996 SIRPGQ9P1W8 387 aa16.38■□□□□ 0.21
TPM1-201ENST00000267996 CORO1CQ9ULV4 474 aaPredicted RBP16.38■□□□□ 0.21
TPM1-201ENST00000267996 PHTF1Q9UMS5 762 aa16.38■□□□□ 0.21
TPM1-201ENST00000267996 A0A1W2PQ67 120 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 WDR91A4D1P6 747 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 ERICH4A6NGS2 130 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 CAPN8A6NHC0 703 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 KLF11O14901 512 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms