RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 IL37Q9NZH6 218 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 MTMR11A4FU01 709 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 H3BNX3 289 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 MUSKO15146 869 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 IPO13O94829 963 aaKnown RBP12.94□□□□□ -0.34
CPSF6-201ENST00000266679 RTN3O95197 1032 aaPredicted RBP12.94□□□□□ -0.34
CPSF6-201ENST00000266679 S1PR4O95977 384 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 PIRTP0C851 137 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 XRCC1P18887 633 aaPredicted RBP12.94□□□□□ -0.34
CPSF6-201ENST00000266679 FAM189BP81408 668 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 ZNF235Q14590 738 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 SHHQ15465 462 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 SFT2D3Q587I9 215 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 NADSYN1Q6IA69 706 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 TMEM207Q6UWW9 146 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 RNF19BQ6ZMZ0 732 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 CUZD1Q86UP6 607 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 ABI1Q8IZP0 508 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 CFAP52Q8N1V2 620 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 TADA1Q96BN2 335 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 DNAJC1Q96KC8 554 aaKnown RBP12.94□□□□□ -0.34
CPSF6-201ENST00000266679 GLT1D1Q96MS3 346 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 SERPINI1Q99574 410 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 CRYL1Q9Y2S2 319 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 VWA7Q9Y334 891 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 ARL5AQ9Y689 179 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 ANKRD36A6QL64 1941 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 MAGEA13PA6NCF6 341 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 MOXD2PA6NHM9 499 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 OR6C75A6NL08 312 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 DRGXA6NNA5 263 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 LDB2O43679 373 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 IGLV3-27P01718 113 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 RBP1P09455 135 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 TACR2P21452 398 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 MSX2P35548 267 aaPredicted RBP12.93□□□□□ -0.34
CPSF6-201ENST00000266679 ART3Q13508 389 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 TRIP10Q15642 601 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 LRIT3Q3SXY7 679 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 PARP15Q460N3 678 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 C1orf53Q5VUE5 145 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 RSPO2Q6UXX9 243 aaPredicted RBP12.93□□□□□ -0.34
CPSF6-201ENST00000266679 SDCCAG8Q86SQ7 713 aaPredicted RBP12.93□□□□□ -0.34
CPSF6-201ENST00000266679 PDSS2Q86YH6 399 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 LGI2Q8N0V4 545 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 RNF148Q8N7C7 305 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 TMA16Q96EY4 203 aaKnown RBP12.93□□□□□ -0.34
CPSF6-201ENST00000266679 MAELQ96JY0 434 aaKnown RBP12.93□□□□□ -0.34
CPSF6-201ENST00000266679 TBATAQ96M53 351 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 TSEN34Q9BSV6 310 aaKnown RBP12.93□□□□□ -0.34
CPSF6-201ENST00000266679 KLHL4Q9C0H6 718 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 YIPF3Q9GZM5 350 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 POLR1EQ9GZS1 481 aaKnown RBP12.93□□□□□ -0.34
CPSF6-201ENST00000266679 WDR41Q9HAD4 459 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 STK39Q9UEW8 545 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 ACTL7AQ9Y615 435 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 CHD7Q9P2D1 2997 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 LOC285095A0A1B0GVY8 99 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 FAM92AA1XBS5 289 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 STX16-NPEPL1H3BU86 382 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 VNN2O95498 520 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 GOT2P00505 430 aaKnown RBP12.93□□□□□ -0.34
CPSF6-201ENST00000266679 TSPAN8P19075 237 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 PBX3P40426 434 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 DPP6P42658 865 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 ATXN3P54252 364 aaPredicted RBP12.93□□□□□ -0.34
CPSF6-201ENST00000266679 AQP4P55087 323 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 MRPL58Q14197 206 aaKnown RBP12.93□□□□□ -0.34
CPSF6-201ENST00000266679 GSTA3Q16772 222 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 ZNF423Q2M1K9 1284 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 ARMC3Q5W041 872 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 KBTBD6Q86V97 674 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 PGAM4Q8N0Y7 254 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 AFAP1L2Q8N4X5 818 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 DEFB123Q8N688 67 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 GATA6Q92908 595 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 CCDC126Q96EE4 140 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 VCX3BQ9H321 246 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 EML4Q9HC35 981 aaKnown RBP12.93□□□□□ -0.34
CPSF6-201ENST00000266679 TMEM39AQ9NV64 488 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 MARCH5Q9NX47 278 aa12.93□□□□□ -0.34
CPSF6-201ENST00000266679 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.93□□□□□ -0.34
CPSF6-201ENST00000266679 NT5C1B-RDH14C9J2C7 533 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 MAP3K13O43283 966 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 KIF1CO43896 1103 aaKnown RBP12.92□□□□□ -0.34
CPSF6-201ENST00000266679 PRAMEF11O60813 436 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 ADSLP30566 484 aaPredicted RBP12.92□□□□□ -0.34
CPSF6-201ENST00000266679 KCNQ1P51787 676 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 SATB1Q01826 763 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 TNK2Q07912 1038 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 CEACAM7Q14002 265 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 SEMA3AQ14563 771 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 ACAP2Q15057 778 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 SLC14A2Q15849 920 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 PPP1R3AQ16821 1122 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 PIGGQ5H8A4 983 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 FAM45BPQ6NSW5 357 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 PELI3Q8N2H9 469 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 RYBPQ8N488 228 aaPredicted RBP12.92□□□□□ -0.34
CPSF6-201ENST00000266679 OR13C4Q8NGS5 318 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms