RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 TXNL4AP83876 142 aaKnown RBP12.49□□□□□ -0.41
BEST3-201ENST00000266661 NFKB2Q00653 900 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 ACVR1Q04771 509 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 FASTKQ14296 549 aaKnown RBP12.49□□□□□ -0.41
BEST3-201ENST00000266661 MAPRE2Q15555 327 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 C6orf10Q5SRN2 563 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 C6orf52Q5T4I8 152 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 AP1ARQ63HQ0 302 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 GDF6Q6KF10 455 aaPredicted RBP12.49□□□□□ -0.41
BEST3-201ENST00000266661 MSANTD2Q6P1R3 559 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 ISCA2Q86U28 154 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 METTL23Q86XA0 190 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 SLC22A9Q8IVM8 553 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 FUNDC1Q8IVP5 155 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 PNPLA1Q8N8W4 532 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 LPGAT1Q92604 370 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 FSD1LQ9BXM9 530 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 MRPS26Q9BYN8 205 aaKnown RBP12.49□□□□□ -0.41
BEST3-201ENST00000266661 PCDHAC1Q9H158 963 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 MFSD1Q9H3U5 465 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 EML4Q9HC35 981 aaKnown RBP12.49□□□□□ -0.41
BEST3-201ENST00000266661 CYP4F12Q9HCS2 524 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 VCX3AQ9NNX9 186 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 MRPL40Q9NQ50 206 aaKnown RBP12.49□□□□□ -0.41
BEST3-201ENST00000266661 POLR3BQ9NW08 1133 aaPredicted RBP12.49□□□□□ -0.41
BEST3-201ENST00000266661 HACD3Q9P035 362 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 DSEQ9UL01 958 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 VWA7Q9Y334 891 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 RNF11Q9Y3C5 154 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 DUSP11O75319 330 aaKnown RBP12.48□□□□□ -0.41
BEST3-201ENST00000266661 B3GAT3O94766 335 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 TNFAIP8O95379 198 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 ITGB1P05556 798 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 SPATA31D3P0C874 917 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 GJA8P48165 433 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 ARSDP51689 593 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 NDST2P52849 883 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 SLC12A2P55011 1212 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 SEPT6Q14141 434 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 MAPRE1Q15691 268 aaKnown RBP12.48□□□□□ -0.41
BEST3-201ENST00000266661 SLC5A9Q2M3M2 681 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 AGKQ53H12 422 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 UNC50Q53HI1 259 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 GNASQ5JWF2 1037 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 ZNF678Q5SXM1 525 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 FAM219BQ5XKK7 198 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 SPATA31D4Q6ZUB0 917 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 KDELC2Q7Z4H8 507 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 SERINC5Q86VE9 423 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 SPATA24Q86W54 205 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 ARRDC2Q8TBH0 407 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 TSPAN17Q96FV3 270 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 ZFRQ96KR1 1074 aaKnown RBP12.48□□□□□ -0.41
BEST3-201ENST00000266661 SUSD3Q96L08 255 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 ALPK3Q96L96 1907 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 GPATCH1Q9BRR8 931 aaKnown RBP12.48□□□□□ -0.41
BEST3-201ENST00000266661 CRISPLD2Q9H0B8 497 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 TRPC7Q9HCX4 862 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 VPS45Q9NRW7 570 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 MARCH4Q9P2E8 410 aaPredicted RBP12.48□□□□□ -0.41
BEST3-201ENST00000266661 MTF2Q9Y483 593 aaPredicted RBP12.48□□□□□ -0.41
BEST3-201ENST00000266661 TRAF6Q9Y4K3 522 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 AP4S1Q9Y587 144 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 MRPL42Q9Y6G3 142 aaKnown RBP12.48□□□□□ -0.41
BEST3-201ENST00000266661 IGLV3-10A0A075B6K4 115 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 A0A1B0GVG6 124 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 LOC285095A0A1B0GVY8 99 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 J3KR12 359 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 CLPTM1O96005 669 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 SNRPB2P08579 225 aaKnown RBP12.48□□□□□ -0.41
BEST3-201ENST00000266661 ATXN1LP0C7T5 689 aaKnown RBP12.48□□□□□ -0.41
BEST3-201ENST00000266661 RHOQP17081 205 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 TYMPP19971 482 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 GPX3P22352 226 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 SLC7A1P30825 629 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 SUOXP51687 545 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 ATXN3P54252 364 aaPredicted RBP12.48□□□□□ -0.41
BEST3-201ENST00000266661 SLC10A7Q0GE19 358 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 PDAP1Q13442 181 aaKnown RBP12.48□□□□□ -0.41
BEST3-201ENST00000266661 MYLK3Q32MK0 819 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 NADK2Q4G0N4 442 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 PAN2Q504Q3 1202 aaKnown RBP12.48□□□□□ -0.41
BEST3-201ENST00000266661 OVOS1Q6IE37 1185 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 HMBOX1Q6NT76 420 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 ZNF549Q6P9A3 640 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 BORAQ6PGQ7 559 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 C3orf30Q96M34 536 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 SLC25A23Q9BV35 468 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 PTTG2Q9NZH5 202 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 ADA2Q9NZK5 511 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 OGDHLQ9ULD0 1010 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 SCN10AQ9Y5Y9 1956 aa12.48□□□□□ -0.41
BEST3-201ENST00000266661 A0A1W2PQH9 124 aa12.47□□□□□ -0.41
BEST3-201ENST00000266661 M0QZ92 97 aa12.47□□□□□ -0.41
BEST3-201ENST00000266661 INPPL1O15357 1258 aa12.47□□□□□ -0.41
BEST3-201ENST00000266661 LDB2O43679 373 aa12.47□□□□□ -0.41
BEST3-201ENST00000266661 NRP2O60462 931 aa12.47□□□□□ -0.41
BEST3-201ENST00000266661 POMCP01189 267 aa12.47□□□□□ -0.41
BEST3-201ENST00000266661 FGF4P08620 206 aa12.47□□□□□ -0.41
BEST3-201ENST00000266661 ALDOCP09972 364 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms