RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 CHN2P52757 468 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 GNA12Q03113 381 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 IL10RBQ08334 325 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 ARL13AQ5H913 290 aaPredicted RBP16.76■□□□□ 0.27
PHRF1-201ENST00000264555 TTC7BQ86TV6 843 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 TRAPPC5Q8IUR0 188 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 ZNF276Q8N554 614 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 MAPRE3Q9UPY8 281 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 SNTNA6NMZ2 147 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 COX7A2P14406 83 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 GABRR2P28476 465 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 ACAP2Q15057 778 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 MAPKAPK3Q16644 382 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 NRF1Q16656 503 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 GSTA3Q16772 222 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 SLC9A4Q6AI14 798 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 LPCAT2Q7L5N7 544 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 UPF1Q92900 1129 aaKnown RBP eCLIP16.76■□□□□ 0.27
PHRF1-201ENST00000264555 COPS8Q99627 209 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 TBCDQ9BTW9 1192 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 YIPF2Q9BWQ6 316 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 EPS8L2Q9H6S3 715 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 RAI2Q9Y5P3 530 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 RECQL5O94762 991 aaPredicted RBP16.76■□□□□ 0.27
PHRF1-201ENST00000264555 ALDH1A2O94788 518 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 EPN2O95208 641 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 RANBP1P43487 201 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 FAM151BQ6UXP7 276 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 DET1Q7L5Y6 550 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 NECAB2Q7Z6G3 386 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 NPLOC4Q8TAT6 608 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 SLC39A8Q9C0K1 460 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 PIGVQ9NUD9 493 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 CORO1CQ9ULV4 474 aaPredicted RBP16.76■□□□□ 0.27
PHRF1-201ENST00000264555 TDRKHQ9Y2W6 561 aaKnown RBP16.76■□□□□ 0.27
PHRF1-201ENST00000264555 BBIP1A8MTZ0 92 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 IRAK2O43187 625 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 F2P00734 622 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 FTH1P02794 183 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 CYP2A13Q16696 494 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 SWT1Q5T5J6 900 aaKnown RBP16.76■□□□□ 0.27
PHRF1-201ENST00000264555 GLIS1Q8NBF1 620 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 SUSD6Q92537 303 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 TBATAQ96M53 351 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 SNX8Q9Y5X2 465 aa16.76■□□□□ 0.27
PHRF1-201ENST00000264555 FFAR3O14843 346 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 GPR42O15529 346 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 CA12O43570 354 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 EDNRBP24530 442 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 TRPC1P48995 793 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 RFWD3Q6PCD5 774 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 C15orf39Q6ZRI6 1047 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 XYLT2Q9H1B5 865 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 PCDHB1Q9Y5F3 818 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 PRMT5O14744 637 aaPredicted RBP16.75■□□□□ 0.27
PHRF1-201ENST00000264555 LAG3P18627 525 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 PPP2R1BP30154 601 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 ALDH9A1P49189 494 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 NPAS4Q8IUM7 802 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 SCAMP5Q8TAC9 235 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 C2orf15Q8WU43 125 aaKnown RBP16.75■□□□□ 0.27
PHRF1-201ENST00000264555 DEFB118Q96PH6 123 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 VRTNQ9H8Y1 702 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 XIAPP98170 497 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 GPR158Q5T848 1215 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 SCIMPQ6UWF3 145 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 RINLQ6ZS11 566 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 SETD9Q8NE22 299 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 FCRL5Q96RD9 977 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 TRMT13Q9NUP7 481 aaKnown RBP16.75■□□□□ 0.27
PHRF1-201ENST00000264555 GEMIN8Q9NWZ8 242 aaKnown RBP16.75■□□□□ 0.27
PHRF1-201ENST00000264555 A0A087WXM4 84 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 A8MUI8 341 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 HS6ST1O60243 411 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 BBS2Q9BXC9 721 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 OSBPL2Q9H1P3 480 aa16.75■□□□□ 0.27
PHRF1-201ENST00000264555 NRP2O60462 931 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 ANXA6P08133 673 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 FGFR3P22607 806 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 NRLP54845 237 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 TNK2Q07912 1038 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 ADHFE1Q8IWW8 467 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 AGAP2Q99490 1192 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 ZFYVE1Q9HBF4 777 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 PDZK1P1A8MUH7 402 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 POU1F1P28069 291 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 RPL38P63173 70 aaKnown RBP16.74■□□□□ 0.27
PHRF1-201ENST00000264555 IFNL1Q8IU54 200 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 RELL1Q8IUW5 271 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 SEC14L1Q92503 715 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 RAD21L1Q9H4I0 556 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 A0A1B0GVM2 712 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 TCAF2A6NFQ2 919 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 PRDX6P30041 224 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 NEK2P51955 445 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 EML3Q32P44 896 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 MAGED4Q96JG8 741 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 HOPXQ9BPY8 73 aaPredicted RBP16.74■□□□□ 0.27
PHRF1-201ENST00000264555 GATA5Q9BWX5 397 aaPredicted RBP16.74■□□□□ 0.27
PHRF1-201ENST00000264555 MYH7P12883 1935 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms