RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 OR10H3O60404 316 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 CXorf40AQ8TE69 158 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 TRMT13Q9NUP7 481 aaKnown RBP17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 EURLQ9NYK6 297 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 MAGEL2Q9UJ55 1249 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 ZNF214Q9UL59 606 aaPredicted RBP17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 NAV1Q8NEY1 1877 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 C3P01024 1663 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 ABATP80404 500 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 GTF2BQ00403 316 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 BST1Q10588 318 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 HECTD3Q5T447 861 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 C10orf107Q8IVU9 208 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 B3GALT6Q96L58 329 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 PDHXO00330 501 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 C5orf22Q49AR2 442 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 ANKRD52Q8NB46 1076 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 RBM4BQ9BQ04 359 aaKnown RBP17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 RBM4Q9BWF3 364 aaKnown RBP17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 ULBP1Q9BZM6 244 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 NUP214P35658 2090 aaPredicted RBP17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 FGF1P05230 155 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 RPL4P36578 427 aaKnown RBP17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 POTEHQ6S545 545 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 NPNTQ6UXI9 565 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 PACS1Q6VY07 963 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 PPP1R14BQ96C90 147 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 GPN1Q9HCN4 374 aaPredicted RBP17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 PLK4O00444 970 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 MDM4O15151 490 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 DRD4P21917 467 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 RFTN2Q52LD8 501 aaPredicted RBP17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 PTCD2Q8WV60 388 aaKnown RBP17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 PIH1D2Q8WWB5 315 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 FFAR3O14843 346 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 GPR42O15529 346 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 UGT2B11O75310 529 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 BUD31P41223 144 aaPredicted RBP17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 GALNT3Q14435 633 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 MED22Q15528 200 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 C16orf59Q7L2K0 433 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 GRIN3AQ8TCU5 1115 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 HELQQ8TDG4 1101 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 KCNMB3Q9NPA1 279 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 NECTIN3Q9NQS3 549 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 ENTPD5O75356 428 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 LYNP07948 512 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 OMPP47874 163 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 RPL38P63173 70 aaKnown RBP17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 FOXR1Q6PIV2 292 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 FOXR2Q6PJQ5 311 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 PTCHD4Q6ZW05 846 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 GJD3Q8N144 294 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 MTMR9Q96QG7 549 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 SNX15Q9NRS6 342 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 N6AMT1Q9Y5N5 214 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 TCRBV9S1A1TA0A576 114 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 FAM25EA8MYX2 175 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 IFNGP01579 166 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 CHKAP35790 457 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 SLC20A2Q08357 652 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 EARS2Q5JPH6 523 aaKnown RBP17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 NBPF12Q5TAG4 269 aaPredicted RBP17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 ZBTB45Q96K62 511 aaPredicted RBP17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 CAB39LQ9H9S4 337 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 MARSP56192 900 aaKnown RBP17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 TUBB3Q13509 450 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 RIPK1Q13546 671 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 DUPD1Q68J44 220 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 NDNQ99608 321 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 TMEM150BA6NC51 233 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 A8MX80 341 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 EML1O00423 815 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 TRAFD1O14545 582 aaPredicted RBP17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 PPP3CAQ08209 521 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 GPR107Q5VW38 600 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 SPATA19Q7Z5L4 167 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 BORCS5Q969J3 196 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 BLOC1S4Q9NUP1 217 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 KCNE2Q9Y6J6 123 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 AREL1O15033 823 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 GCATO75600 419 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 NR2F6P10588 404 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 SLC9A6Q92581 669 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 KAZALD1Q96I82 304 aa17.5■□□□□ 0.39
NOTCH3-201ENST00000263388 H3BNH8 94 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 DNAJA2O60884 412 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 MATKP42679 507 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 DLG4P78352 724 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 PYHIN1Q6K0P9 492 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 TDRD1Q9BXT4 1180 aaKnown RBP17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 TAS2R14Q9NYV8 317 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 AADACL2Q6P093 401 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 OR4A15Q8NGL6 344 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 FTHL17Q9BXU8 183 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 GSDMCQ9BYG8 508 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 FAM237AA0A1B0GTK4 181 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 PSMD11O00231 422 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms