RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 PMF1Q6P1K2 205 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 FAM151BQ6UXP7 276 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 KLHL23Q8NBE8 558 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 KREMEN1Q96MU8 473 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 ZNF224Q9NZL3 707 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 TMEM216Q9P0N5 145 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 SSR3Q9UNL2 185 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 SLC27A5Q9Y2P5 690 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 SF3B1O75533 1304 aaKnown RBP eCLIP12.09□□□□□ -0.475e-6■■■■■ 69.9
SMG6-201ENST00000263073 TECPR2O15040 1411 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 TGFB1I1O43294 461 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 URODP06132 367 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 TAF13Q15543 124 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 SETMARQ53H47 684 aaPredicted RBP12.09□□□□□ -0.47
SMG6-201ENST00000263073 IKBIPQ70UQ0 350 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 PIGZQ86VD9 579 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 GPR65Q8IYL9 337 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 C1GALT1C1Q96EU7 318 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 ZNF221Q9UK13 617 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 SNX6Q9UNH7 406 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 ENTPD4Q9Y227 616 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 PXDNQ92626 1479 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 DEPDC5O75140 1603 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 NR2F1P10589 423 aa12.08□□□□□ -0.47
SMG6-201ENST00000263073 PRKAR1AP10644 381 aa12.08□□□□□ -0.47
SMG6-201ENST00000263073 RPL4P36578 427 aaKnown RBP12.08□□□□□ -0.47
SMG6-201ENST00000263073 CXCR3P49682 368 aa12.08□□□□□ -0.47
SMG6-201ENST00000263073 KPNA1P52294 538 aaPredicted RBP12.08□□□□□ -0.47
SMG6-201ENST00000263073 RABGGTBP53611 331 aa12.08□□□□□ -0.47
SMG6-201ENST00000263073 AHSA2Q719I0 299 aa12.08□□□□□ -0.47
SMG6-201ENST00000263073 SAMD3Q8N6K7 520 aa12.08□□□□□ -0.47
SMG6-201ENST00000263073 COX4I2Q96KJ9 171 aa12.08□□□□□ -0.47
SMG6-201ENST00000263073 CEP295NLQ96MC4 621 aa12.08□□□□□ -0.47
SMG6-201ENST00000263073 NLNQ9BYT8 704 aa12.08□□□□□ -0.47
SMG6-201ENST00000263073 COMMD9Q9P000 198 aa12.08□□□□□ -0.47
SMG6-201ENST00000263073 MALT1Q9UDY8 824 aa12.08□□□□□ -0.47
SMG6-201ENST00000263073 PCDHGA4Q9Y5G9 962 aa12.08□□□□□ -0.47
SMG6-201ENST00000263073 POU2F1P14859 743 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 TKTP29401 623 aaKnown RBP12.08□□□□□ -0.48
SMG6-201ENST00000263073 IFNGR2P38484 337 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 SCRN3Q0VDG4 424 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 BLMHQ13867 455 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 GLYATQ6IB77 296 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 FAM43BQ6ZT52 329 aaPredicted RBP12.08□□□□□ -0.48
SMG6-201ENST00000263073 CPNE8Q86YQ8 564 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 ZNF781Q8N8C0 355 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 PORCNQ9H237 461 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 ELL3Q9HB65 397 aaPredicted RBP12.08□□□□□ -0.48
SMG6-201ENST00000263073 SLC17A6Q9P2U8 582 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 ADAM28Q9UKQ2 775 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 TBC1D30Q9Y2I9 924 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 NR2E3Q9Y5X4 410 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 KIAA1210Q9ULL0 1709 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 DRG2P55039 364 aaKnown RBP12.08□□□□□ -0.48
SMG6-201ENST00000263073 BNIP2Q12982 314 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 PAOXQ6QHF9 649 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 MOSPD2Q8NHP6 518 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 P2RY11Q96G91 374 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 TSSK3Q96PN8 268 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 FEM1AQ9BSK4 669 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 FBXO44Q9H4M3 255 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 ANGPT4Q9Y264 503 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 TSPAN4O14817 238 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 SPATA31C1P0DKV0 1188 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 CTSKP43235 329 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 MPP1Q00013 466 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 NEK5Q6P3R8 708 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 RASAL3Q86YV0 1011 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 IFNLR1Q8IU57 520 aaPredicted RBP12.08□□□□□ -0.48
SMG6-201ENST00000263073 CFAP52Q8N1V2 620 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 LENG8Q96PV6 779 aaPredicted RBP12.08□□□□□ -0.48
SMG6-201ENST00000263073 CHCHD6Q9BRQ6 235 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 ACAT2Q9BWD1 397 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 MARCH2Q9P0N8 246 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 ENOPH1Q9UHY7 261 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 FAM237AA0A1B0GTK4 181 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 DYRK3O43781 588 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 NOL4O94818 638 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 IGSF6O95976 241 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 ITPKAP23677 461 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 COPZ1P61923 177 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 MFSD10Q14728 455 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 HGSNATQ68CP4 663 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 RETSATQ6NUM9 610 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 CYP4X1Q8N118 509 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 TCAIMQ8N3R3 496 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 SHC3Q92529 594 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 CHRAC1Q9NRG0 131 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 MBD2Q9UBB5 411 aa12.08□□□□□ -0.48
SMG6-201ENST00000263073 PRPF19Q9UMS4 504 aaKnown RBP12.08□□□□□ -0.48
SMG6-201ENST00000263073 MEGF6O75095 1541 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 CD163L1Q9NR16 1453 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 FAM92AA1XBS5 289 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 SRRM3A6NNA2 597 aaPredicted RBP12.07□□□□□ -0.48
SMG6-201ENST00000263073 ERAL1O75616 437 aaKnown RBP12.07□□□□□ -0.48
SMG6-201ENST00000263073 RXRGP48443 463 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 CLCN5P51795 746 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 TOMM20Q15388 145 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 ZNF613Q6PF04 617 aa12.07□□□□□ -0.48
SMG6-201ENST00000263073 SIPA1Q96FS4 1042 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms