RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 HTRA1Q92743 480 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 LINGO1Q96FE5 620 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 FAM208AQ9UK61 1670 aaKnown RBP13.6□□□□□ -0.23
TCF3-201ENST00000262965 CXCL11O14625 94 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 MTA2O94776 668 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 IPO13O94829 963 aaKnown RBP13.6□□□□□ -0.23
TCF3-201ENST00000262965 ANXA5P08758 320 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 TPSB2P20231 275 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 IDH3AP50213 366 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 TPSAB1Q15661 275 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 ESRP1Q6NXG1 681 aaKnown RBP13.6□□□□□ -0.23
TCF3-201ENST00000262965 NUDT18Q6ZVK8 323 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 CFAP52Q8N1V2 620 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 TMEM86AQ8N2M4 240 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 LENG9Q96B70 501 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 VPS35Q96QK1 796 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 MLPHQ9BV36 600 aaPredicted RBP13.6□□□□□ -0.23
TCF3-201ENST00000262965 EMILIN2Q9BXX0 1053 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 DHX33Q9H6R0 707 aaKnown RBP13.6□□□□□ -0.23
TCF3-201ENST00000262965 TOR4AQ9NXH8 423 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 PCDHB9Q9Y5E1 797 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 PCDHA2Q9Y5H9 948 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 M0R2N6 131 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 KPNA3O00505 521 aaPredicted RBP13.6□□□□□ -0.23
TCF3-201ENST00000262965 SLC22A3O75751 556 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 MYL12AP19105 171 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 PSEN1P49768 467 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 ATP12AP54707 1039 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 XIAPP98170 497 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 CDK18Q07002 472 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 EPS8Q12929 822 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 BNIP2Q12982 314 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 C9orf131Q5VYM1 1079 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 RHBDF2Q6PJF5 856 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 RDH11Q8TC12 318 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 ZNF570Q96NI8 536 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 OR52E6Q96RD3 313 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 EBF2Q9HAK2 575 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 IKZF3Q9UKT9 509 aa13.6□□□□□ -0.23
TCF3-201ENST00000262965 POLR3HQ9Y535 204 aaPredicted RBP13.6□□□□□ -0.23
TCF3-201ENST00000262965 TBKBP1A7MCY6 615 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 CXorf49A8MYA2 514 aaPredicted RBP13.59□□□□□ -0.23
TCF3-201ENST00000262965 MDM4O15151 490 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 MLYCDO95822 493 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 CNPP09543 421 aaKnown RBP13.59□□□□□ -0.23
TCF3-201ENST00000262965 IL1R2P27930 398 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.59□□□□□ -0.23
TCF3-201ENST00000262965 KLF1Q13351 362 aaPredicted RBP13.59□□□□□ -0.23
TCF3-201ENST00000262965 TCEA2Q15560 299 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 ZSWIM7Q19AV6 140 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 STRADAQ7RTN6 431 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 PGAM4Q8N0Y7 254 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 OR2T12Q8NG77 320 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 PANX1Q96RD7 426 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 DUSP16Q9BY84 665 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 ZYG11BQ9C0D3 744 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 SERHL2Q9H4I8 314 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 ALG2Q9H553 416 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 SERHLQ9NQF3 203 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 TRNAU1APQ9NX07 287 aaKnown RBP13.59□□□□□ -0.23
TCF3-201ENST00000262965 UBAP1Q9NZ09 502 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.59□□□□□ -0.232e-6■■□□□ 13.4
TCF3-201ENST00000262965 TSPAN19P0C672 248 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 OR56A5P0C7T3 313 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 TKTP29401 623 aaKnown RBP13.59□□□□□ -0.23
TCF3-201ENST00000262965 NOS3P29474 1203 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 LIMK2P53671 638 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 TSNQ15631 228 aaKnown RBP13.59□□□□□ -0.23
TCF3-201ENST00000262965 EGFLAMQ63HQ2 1017 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 GLYATQ6IB77 296 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 CHMP1BQ7LBR1 199 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 MPP5Q8N3R9 675 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 FSTL5Q8N475 847 aaPredicted RBP13.59□□□□□ -0.23
TCF3-201ENST00000262965 DPP10Q8N608 796 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 BCLAF3A2AJT9 711 aaKnown RBP13.59□□□□□ -0.23
TCF3-201ENST00000262965 KLRG2A4D1S0 409 aaPredicted RBP13.59□□□□□ -0.23
TCF3-201ENST00000262965 TP73O15350 636 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 PAGE1O75459 146 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 TOP3BO95985 862 aaKnown RBP13.59□□□□□ -0.23
TCF3-201ENST00000262965 EGFRP00533 1210 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 URODP06132 367 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 AXLP30530 894 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 FSCN1Q16658 493 aaKnown RBP13.59□□□□□ -0.23
TCF3-201ENST00000262965 INSCQ1MX18 579 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 ANO7Q6IWH7 933 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 ZC3H7AQ8IWR0 971 aaKnown RBP13.59□□□□□ -0.23
TCF3-201ENST00000262965 C19orf60Q96EN9 201 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 TBATAQ96M53 351 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 PANX3Q96QZ0 392 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 OGDHLQ9ULD0 1010 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 LYVE1Q9Y5Y7 322 aa13.59□□□□□ -0.23
TCF3-201ENST00000262965 NID2Q14112 1375 aa13.58□□□□□ -0.23
TCF3-201ENST00000262965 H0YGN5 161 aa13.58□□□□□ -0.23
TCF3-201ENST00000262965 SNPHO15079 494 aa13.58□□□□□ -0.23
TCF3-201ENST00000262965 NCK1P16333 377 aa13.58□□□□□ -0.23
TCF3-201ENST00000262965 PAICSP22234 425 aaKnown RBP13.58□□□□□ -0.23
TCF3-201ENST00000262965 NMBRP28336 390 aa13.58□□□□□ -0.23
TCF3-201ENST00000262965 EPHX2P34913 555 aa13.58□□□□□ -0.23
TCF3-201ENST00000262965 ZNF135P52742 658 aaPredicted RBP13.58□□□□□ -0.23
TCF3-201ENST00000262965 ACTR3P61158 418 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms