RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 GKP32189 559 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 GJA8P48165 433 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 CDKN1CP49918 316 aaPredicted RBP13.63□□□□□ -0.23
VMP1-201ENST00000262291 ERFP50548 548 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 UGP2Q16851 508 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 TSNAXIP1Q2TAA8 658 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 C5orf22Q49AR2 442 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 PTCD2Q8WV60 388 aaKnown RBP13.63□□□□□ -0.23
VMP1-201ENST00000262291 ANKRD49Q8WVL7 239 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 OVCA2Q8WZ82 227 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 MRM3Q9HC36 420 aaKnown RBP13.63□□□□□ -0.23
VMP1-201ENST00000262291 NSMCE4AQ9NXX6 385 aa13.63□□□□□ -0.23
VMP1-201ENST00000262291 NEMP1O14524 444 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 INSIG1O15503 277 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 DLX3O60479 287 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 TMCC1O94876 653 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 CSKP41240 450 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 GRIA4P48058 902 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 KLHDC10Q6PID8 442 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 CILP2Q8IUL8 1156 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 TCEAL8Q8IYN2 117 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 APCDD1Q8J025 514 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 RYBPQ8N488 228 aaPredicted RBP13.62□□□□□ -0.23
VMP1-201ENST00000262291 MAPK15Q8TD08 544 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 EXT2Q93063 718 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 MGME1Q9BQP7 344 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 CORO1BQ9BR76 489 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 TLR9Q9NR96 1032 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 NMRK1Q9NWW6 199 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 CFAP97Q9P2B7 532 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 FIS1Q9Y3D6 152 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 PRR5-ARHGAP8B1AHC4 643 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 TRIM13O60858 407 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 CCDC166P0CW27 439 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 TPP2P29144 1249 aaPredicted RBP13.62□□□□□ -0.23
VMP1-201ENST00000262291 ARHGAP8P85298 464 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 SEMG2Q02383 582 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 HECTD2Q5U5R9 776 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 WDR75Q8IWA0 830 aaKnown RBP13.62□□□□□ -0.23
VMP1-201ENST00000262291 CMTR2Q8IYT2 770 aaKnown RBP13.62□□□□□ -0.23
VMP1-201ENST00000262291 POU5F2Q8N7G0 328 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 OR4K2Q8NGD2 314 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 DDI1Q8WTU0 396 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 TMA16Q96EY4 203 aaKnown RBP13.62□□□□□ -0.23
VMP1-201ENST00000262291 PTCD3Q96EY7 689 aaKnown RBP13.62□□□□□ -0.23
VMP1-201ENST00000262291 FEM1CQ96JP0 617 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 GPR78Q96P69 363 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 RAB3IPQ96QF0 476 aaPredicted RBP13.62□□□□□ -0.23
VMP1-201ENST00000262291 WWP1Q9H0M0 922 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 LRMDAQ9H2I8 198 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 VCXQ9H320 206 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 TLE6Q9H808 572 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 PREBQ9HCU5 417 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 SCOCQ9UIL1 159 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 PCDHB12Q9Y5F1 795 aa13.62□□□□□ -0.23
VMP1-201ENST00000262291 MYOFQ9NZM1 2061 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 ILVBLA1L0T0 632 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 HIDE1A8MVS5 230 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 MEI4A8MW99 385 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 ZSCAN9O15535 394 aaPredicted RBP13.61□□□□□ -0.23
VMP1-201ENST00000262291 BNIP3LO60238 219 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 S1PR4O95977 384 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 PRLP01236 227 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 IL1BP01584 269 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 ESRRAP11474 423 aaPredicted RBP13.61□□□□□ -0.23
VMP1-201ENST00000262291 ETS2P15036 469 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 CD1EP15812 388 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 KCNA5P22460 613 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 IDH3AP50213 366 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 PEX6Q13608 980 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 C1QTNF12Q5T7M4 302 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 C1orf53Q5VUE5 145 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 PLPP4Q5VZY2 271 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 TMEM207Q6UWW9 146 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 BBS7Q8IWZ6 715 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 MDGA1Q8NFP4 955 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 FATE1Q969F0 183 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 TRMT2BQ96GJ1 504 aaKnown RBP13.61□□□□□ -0.23
VMP1-201ENST00000262291 NSL1Q96IY1 281 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 PSKH2Q96QS6 385 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 RAI2Q9Y5P3 530 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 A8MX80 341 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 TMEM233B4DJY2 109 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 GREM1O60565 184 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 NDST3O95803 873 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 ARSAP15289 507 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 CTPS1P17812 591 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 GSTT1P30711 240 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 CSRP3P50461 194 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 ERVFC1P60507 584 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 CDH18Q13634 790 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 SLC9B1Q4ZJI4 515 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 GPR158Q5T848 1215 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 CCDC117Q8IWD4 279 aaPredicted RBP13.61□□□□□ -0.23
VMP1-201ENST00000262291 BBS5Q8N3I7 341 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 TMEM199Q8N511 208 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 RAB3IL1Q8TBN0 382 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 TRIB3Q96RU7 358 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 GPAMQ9HCL2 828 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 IGSF5Q9NSI5 407 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms