RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 FICDQ9BVA6 458 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 ADGRE3Q9BY15 652 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 PHACTR1Q9C0D0 580 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 TRPM6Q9BX84 2022 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 TNRC6BQ9UPQ9 1833 aaKnown RBP20.78■□□□□ 0.92
RTCA-201ENST00000260563 LRRC72A6NJI9 287 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 H0Y858 1186 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 SEMA4FO95754 770 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 GRIA4P48058 902 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 RPL26P61254 145 aaKnown RBP20.78■□□□□ 0.92
RTCA-201ENST00000260563 DHX9Q08211 1270 aaKnown RBP20.78■□□□□ 0.92
RTCA-201ENST00000260563 ELP6Q0PNE2 266 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 GALNT3Q14435 633 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 SLMAPQ14BN4 828 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 BEND6Q5SZJ8 279 aaPredicted RBP20.78■□□□□ 0.92
RTCA-201ENST00000260563 ZC3H14Q6PJT7 736 aaKnown RBP20.78■□□□□ 0.92
RTCA-201ENST00000260563 PIH1D2Q8WWB5 315 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 RMDN1Q96DB5 314 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 TRIB3Q96RU7 358 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 APOL2Q9BQE5 337 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 KDM4CQ9H3R0 1056 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 PCDH12Q9NPG4 1184 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 CASS4Q9NQ75 786 aa20.78■□□□□ 0.92
RTCA-201ENST00000260563 MBD1Q9UIS9 605 aaPredicted RBP20.78■□□□□ 0.92
RTCA-201ENST00000260563 RPL26L1Q9UNX3 145 aaKnown RBP20.78■□□□□ 0.92
RTCA-201ENST00000260563 FAM47DPA6NHR8 397 aa20.77■□□□□ 0.92
RTCA-201ENST00000260563 E7ESA3 106 aa20.77■□□□□ 0.92
RTCA-201ENST00000260563 NEMP1O14524 444 aa20.77■□□□□ 0.92
RTCA-201ENST00000260563 EIF3HO15372 352 aaKnown RBP eCLIP20.77■□□□□ 0.92
RTCA-201ENST00000260563 MAP3K13O43283 966 aa20.77■□□□□ 0.92
RTCA-201ENST00000260563 AP1G1O43747 822 aa20.77■□□□□ 0.92
RTCA-201ENST00000260563 AVILO75366 819 aa20.77■□□□□ 0.92
RTCA-201ENST00000260563 AGTP01019 485 aa20.77■□□□□ 0.92
RTCA-201ENST00000260563 PRLP01236 227 aa20.77■□□□□ 0.92
RTCA-201ENST00000260563 PRKCGP05129 697 aa20.77■□□□□ 0.92
RTCA-201ENST00000260563 MAGEA3P43357 314 aa20.77■□□□□ 0.92
RTCA-201ENST00000260563 TAS2R38P59533 333 aa20.77■□□□□ 0.92
RTCA-201ENST00000260563 RPL6Q02878 288 aaKnown RBP20.77■□□□□ 0.92
RTCA-201ENST00000260563 PDIA2Q13087 525 aaKnown RBP20.77■□□□□ 0.92
RTCA-201ENST00000260563 SRSF5Q13243 272 aaKnown RBP20.77■□□□□ 0.92
RTCA-201ENST00000260563 MTM1Q13496 603 aa20.77■□□□□ 0.92
RTCA-201ENST00000260563 USP45Q70EL2 814 aa20.77■□□□□ 0.92
RTCA-201ENST00000260563 TMC3Q7Z5M5 1100 aa20.77■□□□□ 0.92
RTCA-201ENST00000260563 ABCA7Q8IZY2 2146 aa20.77■□□□□ 0.92
RTCA-201ENST00000260563 OR52K1Q8NGK4 314 aa20.77■□□□□ 0.92
RTCA-201ENST00000260563 OR2T34Q8NGX1 318 aa20.77■□□□□ 0.92
RTCA-201ENST00000260563 GPR174Q9BXC1 333 aa20.77■□□□□ 0.92
RTCA-201ENST00000260563 PREBQ9HCU5 417 aa20.77■□□□□ 0.92
RTCA-201ENST00000260563 ARFGAP3Q9NP61 516 aa20.77■□□□□ 0.92
RTCA-201ENST00000260563 ITM2BQ9Y287 266 aa20.77■□□□□ 0.92
RTCA-201ENST00000260563 FADS3Q9Y5Q0 445 aa20.77■□□□□ 0.92
RTCA-201ENST00000260563 DOCK9Q9BZ29 2069 aa20.76■□□□□ 0.91
RTCA-201ENST00000260563 PRR23AA6NEV1 266 aa20.76■□□□□ 0.91
RTCA-201ENST00000260563 AP3B1O00203 1094 aa20.76■□□□□ 0.91
RTCA-201ENST00000260563 NDST3O95803 873 aa20.76■□□□□ 0.91
RTCA-201ENST00000260563 BCKDHBP21953 392 aa20.76■□□□□ 0.91
RTCA-201ENST00000260563 CDH17Q12864 832 aa20.76■□□□□ 0.91
RTCA-201ENST00000260563 TCF15Q12870 199 aa20.76■□□□□ 0.91
RTCA-201ENST00000260563 CBLBQ13191 982 aa20.76■□□□□ 0.91
RTCA-201ENST00000260563 MSS51Q4VC12 460 aa20.76■□□□□ 0.91
RTCA-201ENST00000260563 DNAJC21Q5F1R6 531 aaKnown RBP20.76■□□□□ 0.91
RTCA-201ENST00000260563 RANBP10Q6VN20 620 aa20.76■□□□□ 0.91
RTCA-201ENST00000260563 DNAAF3Q8N9W5 541 aa20.76■□□□□ 0.91
RTCA-201ENST00000260563 TXLNGYQ9BZA5 131 aa20.76■□□□□ 0.91
RTCA-201ENST00000260563 KCNH6Q9H252 994 aa20.76■□□□□ 0.91
RTCA-201ENST00000260563 SAYSD1Q9NPB0 183 aa20.76■□□□□ 0.91
RTCA-201ENST00000260563 PIH1D1Q9NWS0 290 aaKnown RBP20.76■□□□□ 0.91
RTCA-201ENST00000260563 GGT7Q9UJ14 662 aa20.76■□□□□ 0.91
RTCA-201ENST00000260563 SCN8AQ9UQD0 1980 aa20.76■□□□□ 0.91
RTCA-201ENST00000260563 PLXNA2O75051 1894 aa20.76■□□□□ 0.91
RTCA-201ENST00000260563 TBC1D3DA0A087WVF3 549 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 TBC1D3IA0A087WXS9 549 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 TBC1D3EA0A087X179 549 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 TBC1D3KA0A087X1G2 549 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 A0A0J9YYE9 177 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 LOC285095A0A1B0GVY8 99 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 TBC1D3FA6NER0 549 aaPredicted RBP20.75■□□□□ 0.91
RTCA-201ENST00000260563 ANKRD66B4E2M5 251 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 TBC1D3LB9A6J9 549 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 AREL1O15033 823 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 SPINT1O43278 529 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 LILRB5O75023 590 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 PCDH8O95206 1070 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 EPOP01588 193 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 TRBC1P01850 177 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 TBC1D3HP0C7X1 549 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 CYP2A6P11509 494 aaPredicted RBP20.75■□□□□ 0.91
RTCA-201ENST00000260563 CTPS1P17812 591 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 HLA-DPA1P20036 260 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 MMP12P39900 470 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 FAM193AP78312 1265 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 BBS9Q3SYG4 887 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 TBC1D3GQ6DHY5 549 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 TBC1D3CQ6IPX1 549 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 CEP68Q76N32 757 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 RELL1Q8IUW5 271 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 ZBED8Q8IZ13 594 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 TBC1D3Q8IZP1 549 aaPredicted RBP20.75■□□□□ 0.91
RTCA-201ENST00000260563 PPIL1Q9Y3C6 166 aa20.75■□□□□ 0.91
RTCA-201ENST00000260563 CAPN8A6NHC0 703 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms