RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 KITP10721 976 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 PMS1P54277 932 aaKnown RBP13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 CCZ1BP86790 482 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 CCZ1P86791 482 aaPredicted RBP13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 C10orf62Q5T681 223 aaPredicted RBP13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 FOXR1Q6PIV2 292 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 CCNI2Q6ZMN8 369 aaPredicted RBP13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 CENPLQ8N0S6 344 aaPredicted RBP13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 SLC39A11Q8N1S5 342 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 DCAKDQ8WVC6 231 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 FAM3CQ92520 227 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 ARMC5Q96C12 935 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 GTPBP2Q9BX10 602 aaKnown RBP13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 ADPRHL2Q9NX46 363 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 PCDHGA2Q9Y5H1 932 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 PTGER3P43115 390 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 ASMTP46597 345 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 INCA1Q0VD86 236 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 RUNX3Q13761 415 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 WDR48Q8TAF3 677 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 GFM2Q969S9 779 aaKnown RBP13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 LRRC1Q9BTT6 524 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 FZD10Q9ULW2 581 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 NRAPQ86VF7 1730 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 GPR32O75388 356 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 ESR1P03372 595 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 MRPS21P82921 87 aaKnown RBP13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 OR2AP1Q8NGE2 309 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 MIPOL1Q8TD10 442 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 ZDHHC12Q96GR4 267 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 NR1H4Q96RI1 486 aaPredicted RBP13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 DPYSL5Q9BPU6 564 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 EFCAB1Q9HAE3 211 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 EVLQ9UI08 416 aaPredicted RBP13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 WDR27A2RRH5 827 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 ZSCAN9O15535 394 aaPredicted RBP13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 ENO2P09104 434 aaPredicted RBP13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 SNCBQ16143 134 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 SOWAHAQ2M3V2 549 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 VPS26BQ4G0F5 336 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 TPRG1Q6ZUI0 275 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 NIPA2Q8N8Q9 360 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 KLHDC9Q8NEP7 349 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 METTL6Q8TCB7 284 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 ZHX1-C8orf76Q96EF9 292 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 CEP19Q96LK0 163 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 MRPL57Q9BQC6 102 aaKnown RBP13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 DPEP2Q9H4A9 486 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 SPHK2Q9NRA0 654 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 IMP3Q9NV31 184 aaKnown RBP13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 FBXL12Q9NXK8 326 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 CACNA2D2Q9NY47 1150 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 OR10H1Q9Y4A9 318 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 IGKV6-21A0A0C4DH24 114 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 PI15O43692 258 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 C5AR1P21730 350 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 NTSR1P30989 418 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 ASPAP45381 313 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 HSPA13P48723 471 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 CHI3L2Q15782 390 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 C15orf59Q2T9L4 293 aaPredicted RBP13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 C1orf146Q5VVC0 180 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 SCIMPQ6UWF3 145 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 SYT12Q8IV01 421 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 ACTRT2Q8TDY3 377 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 TOP1MTQ969P6 601 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 SLC4A5Q9BY07 1137 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 KCNN2Q9H2S1 579 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 ZNF576Q9H609 170 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 TRPC4Q9UBN4 977 aa13.44□□□□□ -0.26
PRPF38A-201ENST00000257181 MYBPHLA2RUH7 354 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 C9IYK1 514 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 CA3P07451 260 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 PSMB4P28070 264 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 HSPA14Q0VDF9 509 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 KYNUQ16719 465 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 LRRTM4Q86VH4 590 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 AMZ2Q86W34 360 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 GAS2L3Q86XJ1 694 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 CACUL1Q86Y37 369 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 TMC8Q8IU68 726 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 HID1Q8IV36 788 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 ADAMTS18Q8TE60 1221 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 PDLIM2Q96JY6 352 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 HGH1Q9BTY7 390 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 CCDC177Q9NQR7 707 aaPredicted RBP13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 ATP6V1HQ9UI12 483 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 KLF8O95600 359 aaPredicted RBP13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 GOT1P17174 413 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 HOXA9P31269 272 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 PPARDQ03181 441 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 MAPK15Q8TD08 544 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 TMEM209Q96SK2 561 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 KCNS3Q9BQ31 491 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 CFHR5Q9BXR6 569 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 FAM220BPB1ANY3 271 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 GABRDO14764 452 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 LIASO43766 372 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 CLEC20AQ6ZU45 233 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 GJD3Q8N144 294 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms