RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 CCDC162PA2VCL2 907 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 SLC7A4O43246 635 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 FZD6O60353 706 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 CYP17A1P05093 508 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 PRSS56P0CW18 603 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 NQO1P15559 274 aaKnown RBP18.95■□□□□ 0.62
TRIM47-201ENST00000254816 AP1S1P61966 158 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 ACVR1Q04771 509 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 ZNF460Q14592 562 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 OTOAQ7RTW8 1153 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 ADIPOR2Q86V24 386 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 OTUB2Q96DC9 234 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 MFSD1Q9H3U5 465 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 KIF26AQ9ULI4 1882 aaPredicted RBP18.94■□□□□ 0.62
TRIM47-201ENST00000254816 A0A096LPK6 155 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 PHGDHO43175 533 aaKnown RBP18.94■□□□□ 0.62
TRIM47-201ENST00000254816 RPP40O75818 363 aaKnown RBP18.94■□□□□ 0.62
TRIM47-201ENST00000254816 CRTAMO95727 393 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 ALPIP09923 528 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 ZNF140P52738 457 aaPredicted RBP18.94■□□□□ 0.62
TRIM47-201ENST00000254816 EPHB1P54762 984 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 HYAL1Q12794 435 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 USP10Q14694 798 aaKnown RBP18.94■□□□□ 0.62
TRIM47-201ENST00000254816 UGP2Q16851 508 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 GEN1Q17RS7 908 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 GPATCH11Q8N954 259 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 STYXQ8WUJ0 223 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 OSCP1Q8WVF1 389 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 SORCS1Q8WY21 1168 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 KLHL29Q96CT2 875 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 MYO19Q96H55 970 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 ASB16Q96NS5 453 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 TMEM216Q9P0N5 145 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 SLC25A13Q9UJS0 675 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 FAM95CA0A1B0GW59 222 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 CFAP73A6NFT4 308 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 SLC9A3R1O14745 358 aaPredicted RBP18.94■□□□□ 0.62
TRIM47-201ENST00000254816 GLRA3O75311 464 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 PAPLNO95428 1278 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 IGSF6O95976 241 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 C2P06681 752 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 BGNP21810 368 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 CD151P48509 253 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 BCL2L1Q07817 233 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 TAF1AQ15573 450 aaPredicted RBP18.94■□□□□ 0.62
TRIM47-201ENST00000254816 EML3Q32P44 896 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 RBM20Q5T481 1227 aaKnown RBP18.94■□□□□ 0.62
TRIM47-201ENST00000254816 ARMC12Q5T9G4 340 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 RAPH1Q70E73 1250 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 CILP2Q8IUL8 1156 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 OR2AP1Q8NGE2 309 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 CALML6Q8TD86 181 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 ERP27Q96DN0 273 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 CDKN2AIPNLQ96HQ2 116 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 ELMO2Q96JJ3 720 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 NDNQ99608 321 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 CDCA3Q99618 268 aaPredicted RBP18.94■□□□□ 0.62
TRIM47-201ENST00000254816 BPIFA1Q9NP55 256 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 NPHS2Q9NP85 383 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 MARK1Q9P0L2 795 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 BAIAP2L1Q9UHR4 511 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 HS3ST2Q9Y278 367 aa18.94■□□□□ 0.62
TRIM47-201ENST00000254816 DOCK8Q8NF50 2099 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 PGLSO95336 258 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 ATP6V1G2O95670 118 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 NEFHP12036 1026 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 ARSAP15289 507 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 ECT2LQ008S8 904 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 LAMB3Q13751 1172 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 SEMA3AQ14563 771 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 RALGPS1Q5JS13 557 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 C22orf39Q6P5X5 142 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 GPR149Q86SP6 731 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 C12orf40Q86WS4 652 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 CEP97Q8IW35 865 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 PAF1Q8N7H5 531 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 CYB5D2Q8WUJ1 264 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 TIFAQ96CG3 184 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 EBF3Q9H4W6 596 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 MANSC1Q9H8J5 431 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 DZANK1Q9NVP4 752 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 NLE1Q9NVX2 485 aaPredicted RBP18.93■□□□□ 0.62
TRIM47-201ENST00000254816 DCDC2Q9UHG0 476 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 FNDC3AQ9Y2H6 1198 aaKnown RBP18.93■□□□□ 0.62
TRIM47-201ENST00000254816 TNRC18O15417 2968 aaPredicted RBP18.93■□□□□ 0.62
TRIM47-201ENST00000254816 TRAFD1O14545 582 aaPredicted RBP18.93■□□□□ 0.62
TRIM47-201ENST00000254816 OVGP1Q12889 678 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 MBLAC2Q68D91 279 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 SYCE2Q6PIF2 218 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 BPIFB1Q8TDL5 484 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 C10orf82Q8WW14 230 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 PIH1D2Q8WWB5 315 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 SMARCD2Q92925 531 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 VOPP1Q96AW1 172 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 POLR3BQ9NW08 1133 aaPredicted RBP18.93■□□□□ 0.62
TRIM47-201ENST00000254816 USH1CQ9Y6N9 552 aa18.93■□□□□ 0.62
TRIM47-201ENST00000254816 C2orf81A6NN90 581 aa18.92■□□□□ 0.62
TRIM47-201ENST00000254816 CD3EAPO15446 510 aaKnown RBP18.92■□□□□ 0.62
TRIM47-201ENST00000254816 MPOP05164 745 aa18.92■□□□□ 0.62
TRIM47-201ENST00000254816 KRT16P08779 473 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms