RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 PWWP2AQ96N64 755 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 SLITRK2Q9H156 845 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 RNPEPL1Q9HAU8 725 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 CHKBQ9Y259 395 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 FAM25AB3EWG3 89 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 FAM25CB3EWG5 89 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 FAM25GB3EWG6 89 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 ACSL4O60488 711 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 NTRK1P04629 796 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 PMF1Q6P1K2 205 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 C10orf107Q8IVU9 208 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 FUKQ8N0W3 1084 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 CFAP52Q8N1V2 620 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 MAGEH1Q9H213 219 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 SERHL2Q9H4I8 314 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 LRRC4CQ9HCJ2 640 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 SERHLQ9NQF3 203 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 ZSCAN32Q9NX65 697 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 PAIP2BQ9ULR5 123 aaKnown RBP19■□□□□ 0.63
PTPRE-201ENST00000254667 ARL5CA6NH57 179 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 TGDSO95455 350 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 CRHR1P34998 444 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 CXCR3P49682 368 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 ELF3P78545 371 aaPredicted RBP19■□□□□ 0.63
PTPRE-201ENST00000254667 AGMOQ6ZNB7 445 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 STYXQ8WUJ0 223 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 ITCHQ96J02 903 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 SMAD5Q99717 465 aaKnown RBP19■□□□□ 0.63
PTPRE-201ENST00000254667 FZD8Q9H461 694 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 ZFP14Q9HCL3 533 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19■□□□□ 0.63
PTPRE-201ENST00000254667 GLYATL1P3A0A0U1RQE8 302 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 AP2A1O95782 977 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 BPGMP07738 259 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 OR4Q2P0C623 313 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 PKMP14618 531 aaKnown RBP19■□□□□ 0.63
PTPRE-201ENST00000254667 RAVER1Q8IY67 606 aaKnown RBP19■□□□□ 0.63
PTPRE-201ENST00000254667 SLC9A7Q96T83 725 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 PRPF19Q9UMS4 504 aaKnown RBP19■□□□□ 0.63
PTPRE-201ENST00000254667 SMIM31A0A1B0GVY4 71 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 RNF225M0QZC1 329 aaPredicted RBP18.99■□□□□ 0.63
PTPRE-201ENST00000254667 PDE9AO76083 593 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 IFNA16P05015 189 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 DRD4P21917 467 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 CLK3P49761 638 aaKnown RBP18.99■□□□□ 0.63
PTPRE-201ENST00000254667 CCR4P51679 360 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 PRKAG1P54619 331 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 SLC25A3Q00325 362 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 ANKRD49Q8WVL7 239 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 BTRCQ9Y297 605 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 BBIP1A8MTZ0 92 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 PMM2O15305 246 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 MED26O95402 600 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 EPORP19235 508 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 HADHBP55084 474 aaKnown RBP18.99■□□□□ 0.63
PTPRE-201ENST00000254667 KLHL35Q6PF15 583 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 CAPNS2Q96L46 248 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 PHPT1Q9NRX4 125 aaPredicted RBP18.99■□□□□ 0.63
PTPRE-201ENST00000254667 RAI2Q9Y5P3 530 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 A0A1B0GVM2 712 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 TCAF2A6NFQ2 919 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 UNCXA6NJT0 531 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 ISM1B1AKI9 464 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 GRIA3P42263 894 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 NDST2P52849 883 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 TRIM40Q6P9F5 258 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 EIF3MQ7L2H7 374 aaKnown RBP18.99■□□□□ 0.63
PTPRE-201ENST00000254667 TNS4Q8IZW8 715 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 C12orf50Q8NA57 414 aaPredicted RBP18.99■□□□□ 0.63
PTPRE-201ENST00000254667 FBXO22Q8NEZ5 403 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 LRRN4Q8WUT4 740 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 FERD3LQ96RJ6 166 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 SLC25A51Q9H1U9 297 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 CENPXA8MT69 81 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 LGR5O75473 907 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 C22orf31O95567 290 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 MFSD5Q6N075 450 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 NEK10Q6ZWH5 1172 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 UBE2R2Q712K3 238 aaPredicted RBP18.99■□□□□ 0.63
PTPRE-201ENST00000254667 COL26A1Q96A83 441 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 PLD4Q96BZ4 506 aa18.99■□□□□ 0.63
PTPRE-201ENST00000254667 ZNF214Q9UL59 606 aaPredicted RBP18.99■□□□□ 0.63
PTPRE-201ENST00000254667 EDF1O60869 148 aaKnown RBP18.98■□□□□ 0.63
PTPRE-201ENST00000254667 TTKP33981 857 aa18.98■□□□□ 0.63
PTPRE-201ENST00000254667 BIKQ13323 160 aa18.98■□□□□ 0.63
PTPRE-201ENST00000254667 PYDC1Q8WXC3 89 aa18.98■□□□□ 0.63
PTPRE-201ENST00000254667 NMD3Q96D46 503 aaKnown RBP18.98■□□□□ 0.63
PTPRE-201ENST00000254667 CORO1CQ9ULV4 474 aaPredicted RBP18.98■□□□□ 0.63
PTPRE-201ENST00000254667 PNMA8CA0A1B0GUJ8 204 aa18.98■□□□□ 0.63
PTPRE-201ENST00000254667 GBE1Q04446 702 aa18.98■□□□□ 0.63
PTPRE-201ENST00000254667 CACNG1Q06432 222 aa18.98■□□□□ 0.63
PTPRE-201ENST00000254667 CBX2Q14781 532 aaPredicted RBP18.98■□□□□ 0.63
PTPRE-201ENST00000254667 CAPN13Q6MZZ7 669 aaPredicted RBP18.98■□□□□ 0.63
PTPRE-201ENST00000254667 TRAF7Q6Q0C0 670 aa18.98■□□□□ 0.63
PTPRE-201ENST00000254667 C16orf62Q7Z3J2 963 aa18.98■□□□□ 0.63
PTPRE-201ENST00000254667 TMEM139Q8IV31 216 aa18.98■□□□□ 0.63
PTPRE-201ENST00000254667 FAM20CQ8IXL6 584 aa18.98■□□□□ 0.63
PTPRE-201ENST00000254667 OR52L1Q8NGH7 329 aa18.98■□□□□ 0.63
PTPRE-201ENST00000254667 SMG7Q92540 1137 aaKnown RBP18.98■□□□□ 0.63
PTPRE-201ENST00000254667 MARK4Q96L34 752 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms