RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 MCMBPQ9BTE3 642 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 ARIH1Q9Y4X5 557 aaPredicted RBP18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 CST1P01037 141 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 CD48P09326 243 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 LPIN1Q14693 890 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 SLC25A52Q3SY17 297 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 SMYD1Q8NB12 490 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 MYO19Q96H55 970 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 SLITRK2Q9H156 845 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 GMPPBQ9Y5P6 360 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 RAPSNQ13702 412 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 LIPMQ5VYY2 423 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 FBXW8Q8N3Y1 598 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 NELL1Q92832 810 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 COPS8Q99627 209 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 WRAP53Q9BUR4 548 aaKnown RBP18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 IKZF3Q9UKT9 509 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 PNMA8CA0A1B0GUJ8 204 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 CENPXA8MT69 81 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 OR10H3O60404 316 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 MPSTP25325 297 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 SEC13P55735 322 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 FNBP1LQ5T0N5 605 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 RAVER1Q8IY67 606 aaKnown RBP18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 POLR1BQ9H9Y6 1135 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 NMUR1Q9HB89 426 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 SPAG4Q9NPE6 437 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 CNGB3Q9NQW8 809 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 EHD3Q9NZN3 535 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 LEF1Q9UJU2 399 aaPredicted RBP18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 KRT33AO76009 404 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 PSMD8P48556 350 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 LRRC73Q5JTD7 316 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 XYLT1Q86Y38 959 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 SLC9A9Q8IVB4 645 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 FUKQ8N0W3 1084 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 STARD8Q92502 1023 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 HTR1BP28222 390 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 FAAH2Q6GMR7 532 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 GK5Q6ZS86 529 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 VANGL1Q8TAA9 524 aaPredicted RBP18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 TSSK3Q96PN8 268 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 FAIM2Q9BWQ8 316 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 TRIM8Q9BZR9 551 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 TMEM216Q9P0N5 145 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 VWA7Q9Y334 891 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 C15orf38-AP3S2A0A0A6YYH1 394 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 GTPBP1O00178 669 aaKnown RBP18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 AZIN1O14977 448 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 MAGEC1O60732 1142 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 PRG2P13727 222 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 TCEA1P23193 301 aaKnown RBP18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 PPM1JQ5JR12 505 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 ARPINQ7Z6K5 226 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 PHF10Q8WUB8 498 aaKnown RBP18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 ATL1Q8WXF7 558 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 REXO2Q9Y3B8 237 aaKnown RBP18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 RECQL5O94762 991 aaPredicted RBP18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 ASGR1P07306 291 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 SLC5A3P53794 718 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 MON1AQ86VX9 555 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 TOP6BLQ8N6T0 577 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 ZMYM2Q9UBW7 1377 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 RFXANKO14593 260 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 ENPP3O14638 875 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 SLC28A2O43868 658 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 PCCBP05166 539 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 SKP1P63208 163 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 CSPG4P5Q96PW8 444 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 TLE6Q9H808 572 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 CHRAC1Q9NRG0 131 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 TIMM22Q9Y584 194 aa18.72■□□□□ 0.59
SMARCC1-201ENST00000254480 TUSC3Q13454 348 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 TIGD2Q4W5G0 525 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 SPANXN2Q5MJ10 180 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 TSHZ1Q6ZSZ6 1077 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 OR52L1Q8NGH7 329 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 SPATA22Q8NHS9 363 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 PPP3R2Q96LZ3 170 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 HBEGFQ99075 208 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 NUAK2Q9H093 628 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 CNOT6Q9ULM6 557 aaKnown RBP18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 OTCP00480 354 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 DNTTP04053 509 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 TKTP29401 623 aaKnown RBP18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 EIF2B2P49770 351 aaKnown RBP18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 ST13P50502 369 aaKnown RBP18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 TATDN1Q6P1N9 297 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 TMPRSS11BQ86T26 416 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 SCAIQ8N9R8 606 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 ZNF540Q8NDQ6 660 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 PTCH2Q9Y6C5 1203 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 RGSL1A5PLK6 1076 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 DSC2Q02487 901 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 ITGADQ13349 1161 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 OR8D1Q8WZ84 308 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 C9IYK1 514 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 DBTP11182 482 aaKnown RBP18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 PAX7P23759 505 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 CXCR2P25025 360 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms