RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 MYL4P12829 197 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 ENO3P13929 434 aaPredicted RBP15.81■□□□□ 0.12
LRFN1-201ENST00000248668 TMCO4Q5TGY1 634 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 CLEC6AQ6EIG7 209 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 KDM1BQ8NB78 822 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 CALML6Q8TD86 181 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 SEPT8Q92599 483 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 CCDC97Q96F63 343 aaPredicted RBP15.81■□□□□ 0.12
LRFN1-201ENST00000248668 PPP1R2P1Q96PQ5 205 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 DRGXA6NNA5 263 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 STX16-NPEPL1H3BU86 382 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 S1PR4O95977 384 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 LTA4HP09960 611 aaKnown RBP15.81■□□□□ 0.12
LRFN1-201ENST00000248668 COL6A2P12110 1019 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 SP100P23497 879 aaPredicted RBP15.81■□□□□ 0.12
LRFN1-201ENST00000248668 ATP5F1P24539 256 aaPredicted RBP15.81■□□□□ 0.12
LRFN1-201ENST00000248668 ATP5C1P36542 298 aaKnown RBP15.81■□□□□ 0.12
LRFN1-201ENST00000248668 LEPRP48357 1165 aaKnown RBP15.81■□□□□ 0.12
LRFN1-201ENST00000248668 DEFB115Q30KQ5 88 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 PARP15Q460N3 678 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 TECRLQ5HYJ1 363 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 NAT14Q8WUY8 206 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 A0A087X1B8 175 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 LRRC14BA6NHZ5 514 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 PRAMEF11O60813 436 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 ATP6V1C1P21283 382 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 PPP1R3AQ16821 1122 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 AGAP9Q5VTM2 703 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 NPAS4Q8IUM7 802 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 PPFIBP2Q8ND30 876 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 RMI1Q9H9A7 625 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 NDE1Q9NXR1 346 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 TSR3Q9UJK0 312 aaKnown RBP15.81■□□□□ 0.12
LRFN1-201ENST00000248668 SUPT7LO94864 414 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 IGLV3-27P01718 113 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 KLKB1P03952 638 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 TCN1P20061 433 aaPredicted RBP15.8■□□□□ 0.12
LRFN1-201ENST00000248668 PMLP29590 882 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 CLCN5P51795 746 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 AP2B1P63010 937 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 GNA12Q03113 381 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 TAF12Q16514 161 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 SPOUT1Q5T280 376 aaKnown RBP15.8■□□□□ 0.12
LRFN1-201ENST00000248668 KLC3Q6P597 504 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.8■□□□□ 0.12
LRFN1-201ENST00000248668 TEX26Q8N6G2 289 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 SLC43A3Q8NBI5 491 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 FAM50BQ9Y247 325 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 PCDHGC4Q9Y5F7 938 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 MROH6A6NGR9 719 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 MAP3K7O43318 606 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 COCHO43405 550 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 ACSL4O60488 711 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 ALDH7A1P49419 539 aaKnown RBP15.8■□□□□ 0.12
LRFN1-201ENST00000248668 PLD1Q13393 1074 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 ANKS3Q6ZW76 656 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 FAM126BQ8IXS8 530 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 EFHBQ8N7U6 833 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 DNMT3LQ9UJW3 386 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 ZNF232Q9UNY5 417 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 POMPQ9Y244 141 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 SPO11Q9Y5K1 396 aa15.8■□□□□ 0.12
LRFN1-201ENST00000248668 SEC24AO95486 1093 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 GLP2RO95838 553 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 SERPINF2P08697 491 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 HOXD9P28356 352 aaPredicted RBP15.79■□□□□ 0.12
LRFN1-201ENST00000248668 BFSP2Q13515 415 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 CCNIQ14094 377 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 ZNF549Q6P9A3 640 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 CCDC117Q8IWD4 279 aaPredicted RBP15.79■□□□□ 0.12
LRFN1-201ENST00000248668 FAM81AQ8TBF8 368 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 AUTS2Q8WXX7 1259 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 TMA16Q96EY4 203 aaKnown RBP15.79■□□□□ 0.12
LRFN1-201ENST00000248668 NPAS2Q99743 824 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 RHBDL2Q9NX52 303 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 CASP8AP2Q9UKL3 1982 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 LOC285095A0A1B0GVY8 99 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 C2orf78A6NCI8 922 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 F8W8V4 182 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 PPP6CO00743 305 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 CD3EAPO15446 510 aaKnown RBP15.79■□□□□ 0.12
LRFN1-201ENST00000248668 IPO13O94829 963 aaKnown RBP15.79■□□□□ 0.12
LRFN1-201ENST00000248668 SIX3O95343 332 aaPredicted RBP15.79■□□□□ 0.12
LRFN1-201ENST00000248668 CORO1AP31146 461 aaKnown RBP15.79■□□□□ 0.12
LRFN1-201ENST00000248668 HTRA3P83110 453 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 SULT2A1Q06520 285 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 KLC1Q07866 573 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 IZUMO2Q6UXV1 221 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 GK5Q6ZS86 529 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 KIAA0408Q6ZU52 694 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 ACTRT2Q8TDY3 377 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 PTERQ96BW5 349 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 PRICKLE1Q96MT3 831 aaPredicted RBP15.79■□□□□ 0.12
LRFN1-201ENST00000248668 CINPQ9BW66 212 aaPredicted RBP15.79■□□□□ 0.12
LRFN1-201ENST00000248668 BPIFA1Q9NP55 256 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 ANGPTL2Q9UKU9 493 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 COPG1Q9Y678 874 aaKnown RBP15.79■□□□□ 0.12
LRFN1-201ENST00000248668 SCN5AQ14524 2016 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 SLC7A4O43246 635 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 CDKN1CP49918 316 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms