RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 STRCQ7RTU9 1775 aa11.02□□□□□ -0.64
COPA-201ENST00000241704 C1QTNF3-AMACRE9PGA6 284 aa11.02□□□□□ -0.64
COPA-201ENST00000241704 ALBP02768 609 aa11.02□□□□□ -0.64
COPA-201ENST00000241704 TFAP2AP05549 437 aa11.02□□□□□ -0.64
COPA-201ENST00000241704 MOGQ16653 247 aa11.02□□□□□ -0.64
COPA-201ENST00000241704 SAPCD2Q86UD0 394 aa11.02□□□□□ -0.64
COPA-201ENST00000241704 OR52K1Q8NGK4 314 aa11.02□□□□□ -0.64
COPA-201ENST00000241704 ZNF296Q8WUU4 475 aaPredicted RBP11.02□□□□□ -0.64
COPA-201ENST00000241704 ACBD6Q9BR61 282 aa11.02□□□□□ -0.64
COPA-201ENST00000241704 ZDHHC6Q9H6R6 413 aa11.02□□□□□ -0.64
COPA-201ENST00000241704 PLLPQ9Y342 182 aa11.02□□□□□ -0.64
COPA-201ENST00000241704 MYH14Q7Z406 1995 aaKnown RBP11.02□□□□□ -0.65
COPA-201ENST00000241704 ARL5CA6NH57 179 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 C5orf58C9J3I9 102 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 EDNRBP24530 442 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 MAPK9P45984 424 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 CSHL1Q14406 222 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 ARHGAP17Q68EM7 881 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 PLD3Q8IV08 490 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 TMEM159Q96B96 161 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 C12orf43Q96C57 262 aaKnown RBP11.02□□□□□ -0.65
COPA-201ENST00000241704 OMA1Q96E52 524 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 CCDC3Q9BQI4 270 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 WDR41Q9HAD4 459 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 RNF112Q9ULX5 631 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 KIAA0100Q14667 2235 aaKnown RBP11.02□□□□□ -0.65
COPA-201ENST00000241704 A0A096LPK6 155 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 SLCO1B7G3V0H7 640 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 DNAJA2O60884 412 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 IL1BP01584 269 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 AOC1P19801 751 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 NFKB1P19838 968 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 RAD23AP54725 363 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 TPTEP56180 551 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 SNRPD1P62314 119 aaKnown RBP11.02□□□□□ -0.65
COPA-201ENST00000241704 PLEKHG4Q58EX7 1191 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 INTS6LQ5JSJ4 861 aaKnown RBP11.02□□□□□ -0.65
COPA-201ENST00000241704 ZNF470Q6ECI4 717 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 CEP68Q76N32 757 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 ANKLE1Q8NAG6 615 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 MINDY2Q8NBR6 621 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 OTUB1Q96FW1 271 aaPredicted RBP11.02□□□□□ -0.65
COPA-201ENST00000241704 CSPG4P5Q96PW8 444 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 TEX12Q9BXU0 123 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 ADAMTS5Q9UNA0 930 aa11.02□□□□□ -0.65
COPA-201ENST00000241704 TIAM2Q8IVF5 1701 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 KLF11O14901 512 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 MDM4O15151 490 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 ERVK-10P10266 1014 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 WARSP23381 471 aaKnown RBP11.01□□□□□ -0.65
COPA-201ENST00000241704 SLC5A2P31639 672 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 PCID2Q5JVF3 399 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 CAMK1DQ8IU85 385 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 HJURPQ8NCD3 748 aaPredicted RBP11.01□□□□□ -0.65
COPA-201ENST00000241704 STARD8Q92502 1023 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 PCYT2Q99447 389 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 SLC4A5Q9BY07 1137 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 TM6SF2Q9BZW4 377 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 EHD1Q9H4M9 534 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 A0A088AWK7 358 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 TBL1XO60907 577 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 TSPAN9O75954 239 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 BPGMP07738 259 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 LBX1P52954 281 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 LRRC74AQ0VAA2 488 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 SETMARQ53H47 684 aaPredicted RBP11.01□□□□□ -0.65
COPA-201ENST00000241704 LDLRAD1Q5T700 205 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 DOK6Q6PKX4 331 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 TDRD5Q8NAT2 981 aaKnown RBP11.01□□□□□ -0.65
COPA-201ENST00000241704 VPS37AQ8NEZ2 397 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 CEP19Q96LK0 163 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 AASDHPPTQ9NRN7 309 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 GLI3P10071 1580 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 MYH1P12882 1939 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 C2CD4BA6NLJ0 364 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 AREL1O15033 823 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 TPST1O60507 370 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 SNAI1O95863 264 aaPredicted RBP11.01□□□□□ -0.65
COPA-201ENST00000241704 ADH1CP00326 375 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 F2P00734 622 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 OR4Q2P0C623 313 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 SERPINH1P50454 418 aaKnown RBP11.01□□□□□ -0.65
COPA-201ENST00000241704 OGFOD2Q6N063 350 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 FCRL2Q96LA5 508 aaPredicted RBP11.01□□□□□ -0.65
COPA-201ENST00000241704 EBNA1BP2Q99848 306 aaKnown RBP11.01□□□□□ -0.65
COPA-201ENST00000241704 TCF25Q9BQ70 676 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 DPEP3Q9H4B8 488 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 MARCH7Q9H992 704 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 RNF186Q9NXI6 227 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 GTF2IRD1Q9UHL9 959 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 RGSL1A5PLK6 1076 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 A8MX80 341 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 FGF19O95750 216 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 PSMA4P25789 261 aaKnown RBP11.01□□□□□ -0.65
COPA-201ENST00000241704 GPD2P43304 727 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 TUBA1BP68363 451 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 TAF10Q12962 218 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 CTC1Q2NKJ3 1217 aa11.01□□□□□ -0.65
COPA-201ENST00000241704 OGFRL1Q5TC84 451 aaPredicted RBP11.01□□□□□ -0.65
COPA-201ENST00000241704 SEL1L3Q68CR1 1132 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms