RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 HACD3Q9P035 362 aa23.32■■□□□ 1.32
MSX2-201ENST00000239243 DNMT3BQ9UBC3 853 aaKnown RBP23.32■■□□□ 1.32
MSX2-201ENST00000239243 PCDHGC4Q9Y5F7 938 aa23.32■■□□□ 1.32
MSX2-201ENST00000239243 SPO11Q9Y5K1 396 aa23.32■■□□□ 1.32
MSX2-201ENST00000239243 BUD23O43709 281 aaKnown RBP23.32■■□□□ 1.32
MSX2-201ENST00000239243 PMLP29590 882 aa23.32■■□□□ 1.32
MSX2-201ENST00000239243 FPGSQ05932 587 aa23.32■■□□□ 1.32
MSX2-201ENST00000239243 ACAP2Q15057 778 aa23.32■■□□□ 1.32
MSX2-201ENST00000239243 TYSND1Q2T9J0 566 aa23.32■■□□□ 1.32
MSX2-201ENST00000239243 UBXN10Q96LJ8 280 aa23.32■■□□□ 1.32
MSX2-201ENST00000239243 TBC1D10AQ9BXI6 508 aa23.32■■□□□ 1.32
MSX2-201ENST00000239243 TLE6Q9H808 572 aa23.32■■□□□ 1.32
MSX2-201ENST00000239243 POPDC3Q9HBV1 291 aa23.32■■□□□ 1.32
MSX2-201ENST00000239243 CAPN14A8MX76 684 aa23.31■■□□□ 1.32
MSX2-201ENST00000239243 LPOP22079 712 aaPredicted RBP23.31■■□□□ 1.32
MSX2-201ENST00000239243 ATP5F1P24539 256 aaPredicted RBP23.31■■□□□ 1.32
MSX2-201ENST00000239243 SERPINB5P36952 375 aa23.31■■□□□ 1.32
MSX2-201ENST00000239243 STC1P52823 247 aa23.31■■□□□ 1.32
MSX2-201ENST00000239243 ATG14Q6ZNE5 492 aa23.31■■□□□ 1.32
MSX2-201ENST00000239243 RTL10Q7L3V2 364 aa23.31■■□□□ 1.32
MSX2-201ENST00000239243 METTL3Q86U44 580 aaKnown RBP23.31■■□□□ 1.32
MSX2-201ENST00000239243 LDB1Q86U70 411 aaPredicted RBP23.31■■□□□ 1.32
MSX2-201ENST00000239243 ZNF781Q8N8C0 355 aa23.31■■□□□ 1.32
MSX2-201ENST00000239243 PRR11Q96HE9 360 aaPredicted RBP23.31■■□□□ 1.32
MSX2-201ENST00000239243 TCF12Q99081 682 aa23.31■■□□□ 1.32
MSX2-201ENST00000239243 BTBD10Q9BSF8 475 aa23.31■■□□□ 1.32
MSX2-201ENST00000239243 A0A1W2PRU2 124 aa23.31■■□□□ 1.32
MSX2-201ENST00000239243 DLX3O60479 287 aa23.31■■□□□ 1.32
MSX2-201ENST00000239243 ATP6V1G2O95670 118 aa23.31■■□□□ 1.32
MSX2-201ENST00000239243 FGF19O95750 216 aa23.31■■□□□ 1.32
MSX2-201ENST00000239243 CCDC166P0CW27 439 aa23.31■■□□□ 1.32
MSX2-201ENST00000239243 IDH3AP50213 366 aa23.31■■□□□ 1.32
MSX2-201ENST00000239243 ALDH18A1P54886 795 aaKnown RBP23.31■■□□□ 1.32
MSX2-201ENST00000239243 DNAJB13P59910 316 aa23.31■■□□□ 1.32
MSX2-201ENST00000239243 AP1S1P61966 158 aa23.31■■□□□ 1.32
MSX2-201ENST00000239243 PRKAA1Q13131 559 aa23.31■■□□□ 1.32
MSX2-201ENST00000239243 TECRLQ5HYJ1 363 aa23.31■■□□□ 1.32
MSX2-201ENST00000239243 RAD9AQ99638 391 aa23.31■■□□□ 1.32
MSX2-201ENST00000239243 NCKIPSDQ9NZQ3 722 aa23.31■■□□□ 1.32
MSX2-201ENST00000239243 ARMCX1Q9P291 453 aa23.31■■□□□ 1.32
MSX2-201ENST00000239243 KIAA0100Q14667 2235 aaKnown RBP23.3■■□□□ 1.32
MSX2-201ENST00000239243 SLCO1B7G3V0H7 640 aa23.3■■□□□ 1.32
MSX2-201ENST00000239243 PDHA1P08559 390 aa23.3■■□□□ 1.32
MSX2-201ENST00000239243 NAGLUP54802 743 aa23.3■■□□□ 1.32
MSX2-201ENST00000239243 TRAF2Q12933 501 aa23.3■■□□□ 1.32
MSX2-201ENST00000239243 TUBB3Q13509 450 aa23.3■■□□□ 1.32
MSX2-201ENST00000239243 PTPRCAPQ14761 206 aa23.3■■□□□ 1.32
MSX2-201ENST00000239243 PPM1LQ5SGD2 360 aa23.3■■□□□ 1.32
MSX2-201ENST00000239243 PIWIL4Q7Z3Z4 852 aaKnown RBP23.3■■□□□ 1.32
MSX2-201ENST00000239243 TTC16Q8NEE8 873 aa23.3■■□□□ 1.32
MSX2-201ENST00000239243 MDGA1Q8NFP4 955 aa23.3■■□□□ 1.32
MSX2-201ENST00000239243 OR4K2Q8NGD2 314 aa23.3■■□□□ 1.32
MSX2-201ENST00000239243 SP7Q8TDD2 431 aaPredicted RBP23.3■■□□□ 1.32
MSX2-201ENST00000239243 CORO1BQ9BR76 489 aa23.3■■□□□ 1.32
MSX2-201ENST00000239243 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.3■■□□□ 1.32
MSX2-201ENST00000239243 VPS9D1Q9Y2B5 631 aa23.3■■□□□ 1.32
MSX2-201ENST00000239243 CRYL1Q9Y2S2 319 aa23.3■■□□□ 1.32
MSX2-201ENST00000239243 ZNF195O14628 629 aa23.29■■□□□ 1.32
MSX2-201ENST00000239243 PFDN6O15212 129 aa23.29■■□□□ 1.32
MSX2-201ENST00000239243 NPHS1O60500 1241 aa23.29■■□□□ 1.32
MSX2-201ENST00000239243 FDXRP22570 491 aa23.29■■□□□ 1.32
MSX2-201ENST00000239243 PSRC1Q6PGN9 363 aaPredicted RBP23.29■■□□□ 1.32
MSX2-201ENST00000239243 MAVSQ7Z434 540 aa23.29■■□□□ 1.32
MSX2-201ENST00000239243 BBS7Q8IWZ6 715 aa23.29■■□□□ 1.32
MSX2-201ENST00000239243 SPATA6LQ8N4H0 392 aa23.29■■□□□ 1.32
MSX2-201ENST00000239243 CCDC106Q9BWC9 280 aa23.29■■□□□ 1.32
MSX2-201ENST00000239243 KIAA1522Q9P206 1035 aaPredicted RBP23.29■■□□□ 1.32
MSX2-201ENST00000239243 WISP3O95389 354 aaPredicted RBP23.29■■□□□ 1.32
MSX2-201ENST00000239243 MAPK8P45983 427 aa23.29■■□□□ 1.32
MSX2-201ENST00000239243 RPL14P50914 215 aaKnown RBP23.29■■□□□ 1.32
MSX2-201ENST00000239243 CDKN2DP55273 166 aa23.29■■□□□ 1.32
MSX2-201ENST00000239243 WFDC5Q8TCV5 224 aa23.29■■□□□ 1.32
MSX2-201ENST00000239243 UTP4Q969X6 686 aaKnown RBP23.29■■□□□ 1.32
MSX2-201ENST00000239243 BAIAP2L1Q9UHR4 511 aa23.29■■□□□ 1.32
MSX2-201ENST00000239243 GYG2O15488 501 aa23.28■■□□□ 1.32
MSX2-201ENST00000239243 CYBBP04839 570 aa23.28■■□□□ 1.32
MSX2-201ENST00000239243 HSPA8P11142 646 aaKnown RBP23.28■■□□□ 1.32
MSX2-201ENST00000239243 PFKPQ01813 784 aa23.28■■□□□ 1.32
MSX2-201ENST00000239243 SLC20A2Q08357 652 aa23.28■■□□□ 1.32
MSX2-201ENST00000239243 EPGNQ6UW88 154 aa23.28■■□□□ 1.32
MSX2-201ENST00000239243 STON2Q8WXE9 905 aa23.28■■□□□ 1.32
MSX2-201ENST00000239243 COG4Q9H9E3 785 aa23.28■■□□□ 1.32
MSX2-201ENST00000239243 VTI1BQ9UEU0 232 aa23.28■■□□□ 1.32
MSX2-201ENST00000239243 TAGLN3Q9UI15 199 aa23.28■■□□□ 1.32
MSX2-201ENST00000239243 ARHGAP26Q9UNA1 814 aa23.28■■□□□ 1.32
MSX2-201ENST00000239243 RPL26L1Q9UNX3 145 aaKnown RBP23.28■■□□□ 1.32
MSX2-201ENST00000239243 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.28■■□□□ 1.32
MSX2-201ENST00000239243 FCF1Q9Y324 198 aaKnown RBP23.28■■□□□ 1.32
MSX2-201ENST00000239243 ANKRD36A6QL64 1941 aa23.28■■□□□ 1.32
MSX2-201ENST00000239243 CXorf51AA0A1B0GTR3 108 aa23.28■■□□□ 1.32
MSX2-201ENST00000239243 LEFTY2O00292 366 aa23.28■■□□□ 1.32
MSX2-201ENST00000239243 DIAPH2O60879 1101 aa23.28■■□□□ 1.32
MSX2-201ENST00000239243 AOC1P19801 751 aa23.28■■□□□ 1.32
MSX2-201ENST00000239243 DDX6P26196 483 aaKnown RBP eCLIP23.28■■□□□ 1.32
MSX2-201ENST00000239243 SUOXP51687 545 aa23.28■■□□□ 1.32
MSX2-201ENST00000239243 ARL13AQ5H913 290 aaPredicted RBP23.28■■□□□ 1.32
MSX2-201ENST00000239243 LONP2Q86WA8 852 aa23.28■■□□□ 1.32
MSX2-201ENST00000239243 MRPL43Q8N983 215 aaKnown RBP23.28■■□□□ 1.32
MSX2-201ENST00000239243 FIBINQ8TAL6 211 aa23.28■■□□□ 1.32
MSX2-201ENST00000239243 BADQ92934 168 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms