RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 HCSTQ9UBK5 93 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 MTRRQ9UBK8 725 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 SEPT3Q9UH03 358 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 TMEM233B4DJY2 109 aa16.21■□□□□ 0.19
UBE3D-201ENST00000237186 NT5C1B-RDH14C9J2C7 533 aa16.21■□□□□ 0.19
UBE3D-201ENST00000237186 AIM2O14862 343 aa16.21■□□□□ 0.19
UBE3D-201ENST00000237186 GJB3O75712 270 aa16.21■□□□□ 0.19
UBE3D-201ENST00000237186 SORBS2O94875 1100 aaKnown RBP16.21■□□□□ 0.19
UBE3D-201ENST00000237186 GOT2P00505 430 aaKnown RBP16.21■□□□□ 0.19
UBE3D-201ENST00000237186 HNRNPLP14866 589 aaKnown RBP eCLIP16.21■□□□□ 0.19
UBE3D-201ENST00000237186 PRMT2P55345 433 aa16.21■□□□□ 0.19
UBE3D-201ENST00000237186 TIAL1Q01085 375 aaKnown RBP eCLIP16.21■□□□□ 0.19
UBE3D-201ENST00000237186 TYSND1Q2T9J0 566 aa16.21■□□□□ 0.19
UBE3D-201ENST00000237186 PPM1LQ5SGD2 360 aa16.21■□□□□ 0.19
UBE3D-201ENST00000237186 TMEM198Q66K66 360 aa16.21■□□□□ 0.19
UBE3D-201ENST00000237186 NXNQ6DKJ4 435 aa16.21■□□□□ 0.19
UBE3D-201ENST00000237186 ZNF549Q6P9A3 640 aa16.21■□□□□ 0.19
UBE3D-201ENST00000237186 DHDDSQ86SQ9 333 aa16.21■□□□□ 0.19
UBE3D-201ENST00000237186 LDB1Q86U70 411 aaPredicted RBP16.21■□□□□ 0.19
UBE3D-201ENST00000237186 CUZD1Q86UP6 607 aa16.21■□□□□ 0.19
UBE3D-201ENST00000237186 RNF135Q8IUD6 432 aa16.21■□□□□ 0.19
UBE3D-201ENST00000237186 PGAM4Q8N0Y7 254 aa16.21■□□□□ 0.19
UBE3D-201ENST00000237186 DNAJC1Q96KC8 554 aaKnown RBP16.21■□□□□ 0.19
UBE3D-201ENST00000237186 PPP1R36Q96LQ0 422 aa16.21■□□□□ 0.19
UBE3D-201ENST00000237186 CATSPER2Q96P56 530 aa16.21■□□□□ 0.19
UBE3D-201ENST00000237186 GSTO2Q9H4Y5 243 aa16.21■□□□□ 0.19
UBE3D-201ENST00000237186 EFCAB1Q9HAE3 211 aa16.21■□□□□ 0.19
UBE3D-201ENST00000237186 ARIH1Q9Y4X5 557 aaPredicted RBP16.21■□□□□ 0.19
UBE3D-201ENST00000237186 BACE2Q9Y5Z0 518 aa16.21■□□□□ 0.19
UBE3D-201ENST00000237186 BRCA2P51587 3418 aa16.21■□□□□ 0.18
UBE3D-201ENST00000237186 CCDC162PA2VCL2 907 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 ZNF840PA6NDX5 716 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 OR51F1A6NGY5 319 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 KDELR3O43731 214 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 CLDN11O75508 207 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 CR2P20023 1033 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 CES1P23141 567 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 NUDT2P50583 147 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 TCTN1Q2MV58 587 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 GPR158Q5T848 1215 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 RNF111Q6ZNA4 994 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 SDCCAG8Q86SQ7 713 aaPredicted RBP16.2■□□□□ 0.18
UBE3D-201ENST00000237186 CFAP52Q8N1V2 620 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 PNPLA1Q8N8W4 532 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 OR4L1Q8NH43 312 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 BLOC1S5Q8TDH9 187 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 SLC26A7Q8TE54 656 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 BCL7CQ8WUZ0 217 aaPredicted RBP16.2■□□□□ 0.18
UBE3D-201ENST00000237186 CWH43Q9H720 699 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 ZDHHC7Q9NXF8 308 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 ARL5AQ9Y689 179 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 ZFP37Q9Y6Q3 630 aaPredicted RBP16.2■□□□□ 0.18
UBE3D-201ENST00000237186 MYLKQ15746 1914 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.2■□□□□ 0.18
UBE3D-201ENST00000237186 ILVBLA1L0T0 632 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 TCAF2A6NFQ2 919 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 CCL22O00626 93 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 BAG2O95816 211 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 CD1DP15813 335 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 KCNC1P48547 511 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 XIAPP98170 497 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 GSTA3Q16772 222 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 PIGGQ5H8A4 983 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 ZNF678Q5SXM1 525 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 HECTD3Q5T447 861 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 PRSS55Q6UWB4 352 aaPredicted RBP16.2■□□□□ 0.18
UBE3D-201ENST00000237186 OR7D4Q8NG98 312 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 RHEBL1Q8TAI7 183 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 PYDC1Q8WXC3 89 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 PLD4Q96BZ4 506 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 CDKN2AIPNLQ96HQ2 116 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 SUDS3Q9H7L9 328 aaPredicted RBP16.2■□□□□ 0.18
UBE3D-201ENST00000237186 CYP4F12Q9HCS2 524 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 CATSPERZQ9NTU4 200 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 INTS10Q9NVR2 710 aaKnown RBP16.2■□□□□ 0.18
UBE3D-201ENST00000237186 NLE1Q9NVX2 485 aaPredicted RBP16.2■□□□□ 0.18
UBE3D-201ENST00000237186 SAGE1Q9NXZ1 904 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 UTP6Q9NYH9 597 aaKnown RBP16.2■□□□□ 0.18
UBE3D-201ENST00000237186 GTSE1Q9NYZ3 720 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 HSFX1Q9UBD0 423 aa16.2■□□□□ 0.18
UBE3D-201ENST00000237186 TBKBP1A7MCY6 615 aa16.19■□□□□ 0.18
UBE3D-201ENST00000237186 ADAM12O43184 909 aa16.19■□□□□ 0.18
UBE3D-201ENST00000237186 CRTAMO95727 393 aa16.19■□□□□ 0.18
UBE3D-201ENST00000237186 CDC25CP30307 473 aa16.19■□□□□ 0.18
UBE3D-201ENST00000237186 DSG1Q02413 1049 aa16.19■□□□□ 0.18
UBE3D-201ENST00000237186 ZNF423Q2M1K9 1284 aa16.19■□□□□ 0.18
UBE3D-201ENST00000237186 CHST9Q7L1S5 443 aa16.19■□□□□ 0.18
UBE3D-201ENST00000237186 APLFQ8IW19 511 aaPredicted RBP16.19■□□□□ 0.18
UBE3D-201ENST00000237186 RNF168Q8IYW5 571 aaPredicted RBP16.19■□□□□ 0.18
UBE3D-201ENST00000237186 OR52K2Q8NGK3 314 aa16.19■□□□□ 0.18
UBE3D-201ENST00000237186 OR13C4Q8NGS5 318 aa16.19■□□□□ 0.18
UBE3D-201ENST00000237186 CCDC124Q96CT7 223 aaKnown RBP16.19■□□□□ 0.18
UBE3D-201ENST00000237186 RCN3Q96D15 328 aa16.19■□□□□ 0.18
UBE3D-201ENST00000237186 ASB2Q96Q27 587 aa16.19■□□□□ 0.18
UBE3D-201ENST00000237186 ECSITQ9BQ95 431 aa16.19■□□□□ 0.18
UBE3D-201ENST00000237186 AARSD1Q9BTE6 412 aaKnown RBP16.19■□□□□ 0.18
UBE3D-201ENST00000237186 ALG9Q9H6U8 611 aa16.19■□□□□ 0.18
UBE3D-201ENST00000237186 CRYL1Q9Y2S2 319 aa16.19■□□□□ 0.18
UBE3D-201ENST00000237186 TRAF6Q9Y4K3 522 aa16.19■□□□□ 0.18
UBE3D-201ENST00000237186 TRIM17Q9Y577 477 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms