RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 C7P10643 843 aa20.64■□□□□ 0.9
SNX3-201ENST00000230085 ODC1P11926 461 aa20.64■□□□□ 0.9
SNX3-201ENST00000230085 PTPN3P26045 913 aa20.64■□□□□ 0.9
SNX3-201ENST00000230085 GALNT1Q10472 559 aaPredicted RBP20.64■□□□□ 0.9
SNX3-201ENST00000230085 UGP2Q16851 508 aa20.64■□□□□ 0.9
SNX3-201ENST00000230085 VARS2Q5ST30 1063 aaKnown RBP20.64■□□□□ 0.9
SNX3-201ENST00000230085 POTEHQ6S545 545 aa20.64■□□□□ 0.9
SNX3-201ENST00000230085 LIMS2Q7Z4I7 341 aa20.64■□□□□ 0.9
SNX3-201ENST00000230085 APPL2Q8NEU8 664 aa20.64■□□□□ 0.9
SNX3-201ENST00000230085 OR52K1Q8NGK4 314 aa20.64■□□□□ 0.9
SNX3-201ENST00000230085 NPY6RQ99463 290 aa20.64■□□□□ 0.9
SNX3-201ENST00000230085 KIFC1Q9BW19 673 aa20.64■□□□□ 0.9
SNX3-201ENST00000230085 MRPL17Q9NRX2 175 aaKnown RBP20.64■□□□□ 0.9
SNX3-201ENST00000230085 OLAHQ9NV23 265 aa20.64■□□□□ 0.9
SNX3-201ENST00000230085 CD300AQ9UGN4 299 aa20.64■□□□□ 0.9
SNX3-201ENST00000230085 PRRC2BQ5JSZ5 2229 aaKnown RBP20.64■□□□□ 0.9
SNX3-201ENST00000230085 XIRP2A4UGR9 3374 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 ATG2AQ2TAZ0 1938 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 ARHGEF37A1IGU5 675 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 CCDC160A6NGH7 325 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 SDHDO14521 159 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 PSMD3O43242 534 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 BMP2P12643 396 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 ENO3P13929 434 aaPredicted RBP20.64■□□□□ 0.89
SNX3-201ENST00000230085 CD1EP15812 388 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 ACADVLP49748 655 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 TKTL1P51854 596 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 ATXN1P54253 815 aaKnown RBP20.64■□□□□ 0.89
SNX3-201ENST00000230085 PKNOX1P55347 436 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 PSME3P61289 254 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 YWHAHQ04917 246 aaPredicted RBP20.64■□□□□ 0.89
SNX3-201ENST00000230085 ZNF33AQ06730 810 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 SEMA3BQ13214 749 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 LRP8Q14114 963 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 OTUD1Q5VV17 481 aaPredicted RBP20.64■□□□□ 0.89
SNX3-201ENST00000230085 FAM45BPQ6NSW5 357 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 PPP4R4Q6NUP7 873 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 RWDD4Q6NW29 188 aaKnown RBP20.64■□□□□ 0.89
SNX3-201ENST00000230085 FAM45AQ8TCE6 357 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 EME1Q96AY2 570 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 PLEKHG4BQ96PX9 1271 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 AGAP2Q99490 1192 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 CCT7Q99832 543 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 EFHD1Q9BUP0 239 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 NUF2Q9BZD4 464 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 DDX18Q9NVP1 670 aaKnown RBP20.64■□□□□ 0.89
SNX3-201ENST00000230085 ARMC1Q9NVT9 282 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 TLK1Q9UKI8 766 aa20.64■□□□□ 0.89
SNX3-201ENST00000230085 PRUNE2Q8WUY3 3088 aa20.63■□□□□ 0.89
SNX3-201ENST00000230085 SH3PXD2BA1X283 911 aa20.63■□□□□ 0.89
SNX3-201ENST00000230085 LILRB3O75022 631 aa20.63■□□□□ 0.89
SNX3-201ENST00000230085 CYP11A1P05108 521 aa20.63■□□□□ 0.89
SNX3-201ENST00000230085 ATP4BP51164 291 aa20.63■□□□□ 0.89
SNX3-201ENST00000230085 MRPL58Q14197 206 aaKnown RBP20.63■□□□□ 0.89
SNX3-201ENST00000230085 IL23RQ5VWK5 629 aa20.63■□□□□ 0.89
SNX3-201ENST00000230085 ITPRIPL1Q6GPH6 555 aa20.63■□□□□ 0.89
SNX3-201ENST00000230085 AMIGO2Q86SJ2 522 aa20.63■□□□□ 0.89
SNX3-201ENST00000230085 TOP6BLQ8N6T0 577 aa20.63■□□□□ 0.89
SNX3-201ENST00000230085 MRPL43Q8N983 215 aaKnown RBP20.63■□□□□ 0.89
SNX3-201ENST00000230085 MRPL38Q96DV4 380 aaKnown RBP20.63■□□□□ 0.89
SNX3-201ENST00000230085 GPR78Q96P69 363 aa20.63■□□□□ 0.89
SNX3-201ENST00000230085 LMAN2LQ9H0V9 348 aa20.63■□□□□ 0.89
SNX3-201ENST00000230085 PLGRKTQ9HBL7 147 aa20.63■□□□□ 0.89
SNX3-201ENST00000230085 TRIM64BA6NI03 449 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 CACNG3O60359 315 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 SLC35E2BP0CK96 405 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 RPL17P18621 184 aaKnown RBP20.62■□□□□ 0.89
SNX3-201ENST00000230085 TYMPP19971 482 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 NOS2P35228 1153 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 SQLEQ14534 574 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 SPATS1Q496A3 300 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 OVOS1Q6IE37 1185 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 Q6ZNX1 250 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 PID1Q7Z2X4 250 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 PYROXD2Q8N2H3 581 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 HDAC11Q96DB2 347 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 RANBP9Q96S59 729 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 MAGEB5Q9BZ81 275 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 TASP1Q9H6P5 420 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 CLK4Q9HAZ1 481 aaKnown RBP20.62■□□□□ 0.89
SNX3-201ENST00000230085 FAIMQ9NVQ4 179 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 IRAK3Q9Y616 596 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 TK2O00142 265 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 XPO1O14980 1071 aaKnown RBP20.62■□□□□ 0.89
SNX3-201ENST00000230085 OAZ2O95190 189 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 IGFBP4P22692 258 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 TTKP33981 857 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 GMPRP36959 345 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 KPNA2P52292 529 aaKnown RBP20.62■□□□□ 0.89
SNX3-201ENST00000230085 DLG2Q15700 870 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 INTS11Q5TA45 600 aaKnown RBP20.62■□□□□ 0.89
SNX3-201ENST00000230085 RSPO2Q6UXX9 243 aaPredicted RBP20.62■□□□□ 0.89
SNX3-201ENST00000230085 ANKS3Q6ZW76 656 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 ZNF554Q86TJ5 538 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 CENPLQ8N0S6 344 aaPredicted RBP20.62■□□□□ 0.89
SNX3-201ENST00000230085 CLEC4CQ8WTT0 213 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 RMND5BQ96G75 393 aaPredicted RBP20.62■□□□□ 0.89
SNX3-201ENST00000230085 SLC2A13Q96QE2 648 aa20.62■□□□□ 0.89
SNX3-201ENST00000230085 CDX2Q99626 313 aaPredicted RBP20.62■□□□□ 0.89
SNX3-201ENST00000230085 SNX25Q9H3E2 840 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms