RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 GNG11P61952 73 aa18.13■□□□□ 0.49
PFN1-201ENST00000225655 ELP6Q0PNE2 266 aa18.13■□□□□ 0.49
PFN1-201ENST00000225655 EIF2B5Q13144 721 aaKnown RBP18.13■□□□□ 0.49
PFN1-201ENST00000225655 PTK2BQ14289 1009 aa18.13■□□□□ 0.49
PFN1-201ENST00000225655 PAFAH1B3Q15102 231 aaKnown RBP18.13■□□□□ 0.49
PFN1-201ENST00000225655 PDZD3Q86UT5 571 aa18.13■□□□□ 0.49
PFN1-201ENST00000225655 ATPAF2Q8N5M1 289 aa18.13■□□□□ 0.49
PFN1-201ENST00000225655 ALG3Q92685 438 aa18.13■□□□□ 0.49
PFN1-201ENST00000225655 EXOC2Q96KP1 924 aa18.13■□□□□ 0.49
PFN1-201ENST00000225655 ZNF641Q96N77 438 aaPredicted RBP18.13■□□□□ 0.49
PFN1-201ENST00000225655 SP110Q9HB58 689 aa18.13■□□□□ 0.49
PFN1-201ENST00000225655 HAUS2Q9NVX0 235 aa18.13■□□□□ 0.49
PFN1-201ENST00000225655 NCKIPSDQ9NZQ3 722 aa18.13■□□□□ 0.49
PFN1-201ENST00000225655 AK5Q9Y6K8 562 aa18.13■□□□□ 0.49
PFN1-201ENST00000225655 U3KQA8 63 aa18.13■□□□□ 0.49
PFN1-201ENST00000225655 LRRK1Q38SD2 2015 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 hCG_1818297A0A087WSY0 165 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 USP27XA6NNY8 438 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 J3KR12 359 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 DDX3YO15523 660 aaKnown RBP18.12■□□□□ 0.49
PFN1-201ENST00000225655 AQP9O43315 295 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 OPA1O60313 960 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 CST8O60676 142 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 MT-CO3P00414 261 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 JUNDP17535 347 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 ITIH2P19823 946 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 NR2C2P49116 596 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 PAPOLAP51003 745 aaKnown RBP18.12■□□□□ 0.49
PFN1-201ENST00000225655 THOP1P52888 689 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 YPEL5P62699 121 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 DYNLT1P63172 113 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 TMEM52BQ4KMG9 183 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 CDCP2Q5VXM1 449 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 AFMIDQ63HM1 303 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 NCBP2-AS2Q69YL0 99 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 SLC9A4Q6AI14 798 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 ZCCHC8Q6NZY4 707 aaKnown RBP18.12■□□□□ 0.49
PFN1-201ENST00000225655 KDM7AQ6ZMT4 941 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 NPWQ8N729 165 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 BTN2A2Q8WVV5 523 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 TBATAQ96M53 351 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 TUBGCP5Q96RT8 1024 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 OSBPL8Q9BZF1 889 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 SLC39A8Q9C0K1 460 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 CARD9Q9H257 536 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 SUV39H2Q9H5I1 410 aa18.12■□□□□ 0.49
PFN1-201ENST00000225655 CELSR3Q9NYQ7 3312 aa18.11■□□□□ 0.49
PFN1-201ENST00000225655 TPP1O14773 563 aa18.11■□□□□ 0.49
PFN1-201ENST00000225655 PPP1R12AO14974 1030 aaPredicted RBP18.11■□□□□ 0.49
PFN1-201ENST00000225655 PIGNO95427 931 aa18.11■□□□□ 0.49
PFN1-201ENST00000225655 PYGMP11217 842 aa18.11■□□□□ 0.49
PFN1-201ENST00000225655 XPAP23025 273 aaPredicted RBP18.11■□□□□ 0.49
PFN1-201ENST00000225655 CSNK1DP48730 415 aa18.11■□□□□ 0.49
PFN1-201ENST00000225655 SEMG2Q02383 582 aa18.11■□□□□ 0.49
PFN1-201ENST00000225655 PDK1Q15118 436 aa18.11■□□□□ 0.49
PFN1-201ENST00000225655 TAZQ16635 292 aa18.11■□□□□ 0.49
PFN1-201ENST00000225655 UGP2Q16851 508 aa18.11■□□□□ 0.49
PFN1-201ENST00000225655 TIGD7Q6NT04 549 aaPredicted RBP18.11■□□□□ 0.49
PFN1-201ENST00000225655 BRAT1Q6PJG6 821 aa18.11■□□□□ 0.49
PFN1-201ENST00000225655 SLC35F6Q8N357 371 aa18.11■□□□□ 0.49
PFN1-201ENST00000225655 BBS5Q8N3I7 341 aa18.11■□□□□ 0.49
PFN1-201ENST00000225655 PQLC3Q8N755 202 aa18.11■□□□□ 0.49
PFN1-201ENST00000225655 TP53I13Q8NBR0 393 aaPredicted RBP18.11■□□□□ 0.49
PFN1-201ENST00000225655 P3H4Q92791 437 aa18.11■□□□□ 0.49
PFN1-201ENST00000225655 FERMT1Q9BQL6 677 aa18.11■□□□□ 0.49
PFN1-201ENST00000225655 WRAP53Q9BUR4 548 aaKnown RBP18.11■□□□□ 0.49
PFN1-201ENST00000225655 BRD8Q9H0E9 1235 aa18.11■□□□□ 0.49
PFN1-201ENST00000225655 MBNL1Q9NR56 388 aaKnown RBP18.11■□□□□ 0.49
PFN1-201ENST00000225655 ETNK2Q9NVF9 386 aa18.11■□□□□ 0.49
PFN1-201ENST00000225655 SPASTQ9UBP0 616 aa18.11■□□□□ 0.49
PFN1-201ENST00000225655 ZKSCAN5Q9Y2L8 839 aa18.11■□□□□ 0.49
PFN1-201ENST00000225655 HEY1Q9Y5J3 304 aa18.11■□□□□ 0.49
PFN1-201ENST00000225655 NBEAQ8NFP9 2946 aa18.1■□□□□ 0.49
PFN1-201ENST00000225655 ANKRD36A6QL64 1941 aa18.1■□□□□ 0.49
PFN1-201ENST00000225655 MFSD11O43934 449 aa18.1■□□□□ 0.49
PFN1-201ENST00000225655 ZNF189O75820 626 aaPredicted RBP18.1■□□□□ 0.49
PFN1-201ENST00000225655 MYF5P13349 255 aa18.1■□□□□ 0.49
PFN1-201ENST00000225655 KRT10P13645 584 aa18.1■□□□□ 0.49
PFN1-201ENST00000225655 IL10RBQ08334 325 aa18.1■□□□□ 0.49
PFN1-201ENST00000225655 CFAP58Q5T655 872 aa18.1■□□□□ 0.49
PFN1-201ENST00000225655 TMCO4Q5TGY1 634 aa18.1■□□□□ 0.49
PFN1-201ENST00000225655 ERAP2Q6P179 960 aa18.1■□□□□ 0.49
PFN1-201ENST00000225655 MACC1Q6ZN28 852 aa18.1■□□□□ 0.49
PFN1-201ENST00000225655 BBS12Q6ZW61 710 aa18.1■□□□□ 0.49
PFN1-201ENST00000225655 ARHGAP12Q8IWW6 846 aa18.1■□□□□ 0.49
PFN1-201ENST00000225655 PLD5Q8N7P1 536 aa18.1■□□□□ 0.49
PFN1-201ENST00000225655 TTC13Q8NBP0 860 aa18.1■□□□□ 0.49
PFN1-201ENST00000225655 LMX1AQ8TE12 382 aa18.1■□□□□ 0.49
PFN1-201ENST00000225655 HEMGNQ9BXL5 484 aa18.1■□□□□ 0.49
PFN1-201ENST00000225655 PCDH12Q9NPG4 1184 aa18.1■□□□□ 0.49
PFN1-201ENST00000225655 APOBEC3BQ9UH17 382 aaKnown RBP18.1■□□□□ 0.49
PFN1-201ENST00000225655 LAMA5O15230 3695 aa18.09■□□□□ 0.49
PFN1-201ENST00000225655 HOXB3P14651 431 aaPredicted RBP18.09■□□□□ 0.49
PFN1-201ENST00000225655 EIF2S3P41091 472 aaKnown RBP18.09■□□□□ 0.49
PFN1-201ENST00000225655 GALNT2Q10471 571 aa18.09■□□□□ 0.49
PFN1-201ENST00000225655 RFTN1Q14699 578 aaPredicted RBP18.09■□□□□ 0.49
PFN1-201ENST00000225655 LRRC14Q15048 493 aa18.09■□□□□ 0.49
PFN1-201ENST00000225655 IRF4Q15306 451 aa18.09■□□□□ 0.49
PFN1-201ENST00000225655 DEFB133Q30KQ1 61 aa18.09■□□□□ 0.49
PFN1-201ENST00000225655 SRLQ86TD4 932 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms