RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 PFKFB4Q16877 469 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 IYDQ6PHW0 289 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 SLC26A11Q86WA9 606 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 OR4K2Q8NGD2 314 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 HEXDCQ8WVB3 486 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 NCKIPSDQ9NZQ3 722 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 ELOAQ14241 798 aaKnown RBP13.78□□□□□ -0.2
SIX4-201ENST00000216513 SCIMPQ6UWF3 145 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 STRADAQ7RTN6 431 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 TEX9Q8N6V9 391 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 TNIP2Q8NFZ5 429 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 KIAA1143Q96AT1 154 aaPredicted RBP13.78□□□□□ -0.2
SIX4-201ENST00000216513 KCTD15Q96SI1 283 aaPredicted RBP13.78□□□□□ -0.2
SIX4-201ENST00000216513 MAGEH1Q9H213 219 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 CNTN3Q9P232 1028 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 PDE5AO76074 875 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 HAPLN1P10915 354 aaPredicted RBP13.78□□□□□ -0.2
SIX4-201ENST00000216513 ACP5P13686 325 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 CPA3P15088 417 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 CXCR3P49682 368 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 STX19Q8N4C7 294 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 CLEC4CQ8WTT0 213 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 SMARCD2Q92925 531 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 ERVK-11Q9UQG0 969 aa13.78□□□□□ -0.2
SIX4-201ENST00000216513 C9J4A7 227 aa13.77□□□□□ -0.2
SIX4-201ENST00000216513 CES2O00748 559 aa13.77□□□□□ -0.2
SIX4-201ENST00000216513 CD3EAPO15446 510 aaKnown RBP13.77□□□□□ -0.2
SIX4-201ENST00000216513 AIF1P55008 147 aa13.77□□□□□ -0.2
SIX4-201ENST00000216513 GPR17Q13304 367 aa13.77□□□□□ -0.2
SIX4-201ENST00000216513 GATAD2AQ86YP4 633 aa13.77□□□□□ -0.2
SIX4-201ENST00000216513 KLHDC7BQ96G42 594 aa13.77□□□□□ -0.2
SIX4-201ENST00000216513 C12orf66Q96MD2 445 aa13.77□□□□□ -0.2
SIX4-201ENST00000216513 STRADBQ9C0K7 418 aa13.77□□□□□ -0.2
SIX4-201ENST00000216513 OR2AG1Q9H205 316 aa13.77□□□□□ -0.2
SIX4-201ENST00000216513 SEMA6AQ9H2E6 1030 aa13.77□□□□□ -0.2
SIX4-201ENST00000216513 LMAN1LQ9HAT1 526 aa13.77□□□□□ -0.2
SIX4-201ENST00000216513 WHRNQ9P202 907 aa13.77□□□□□ -0.2
SIX4-201ENST00000216513 SNX13Q9Y5W8 968 aa13.77□□□□□ -0.2
SIX4-201ENST00000216513 A0A1W2PQ67 120 aa13.77□□□□□ -0.2
SIX4-201ENST00000216513 PAPSS1O43252 624 aaPredicted RBP13.77□□□□□ -0.2
SIX4-201ENST00000216513 PXNP49023 591 aaPredicted RBP13.77□□□□□ -0.2
SIX4-201ENST00000216513 OC90Q02509 493 aaPredicted RBP13.77□□□□□ -0.2
SIX4-201ENST00000216513 TMEM220Q6QAJ8 160 aa13.77□□□□□ -0.2
SIX4-201ENST00000216513 UBE2R2Q712K3 238 aaPredicted RBP13.77□□□□□ -0.2
SIX4-201ENST00000216513 C17orf64Q86WR6 236 aa13.77□□□□□ -0.2
SIX4-201ENST00000216513 KATNAL2Q8IYT4 538 aa13.77□□□□□ -0.2
SIX4-201ENST00000216513 ZCCHC10Q8TBK6 192 aa13.77□□□□□ -0.2
SIX4-201ENST00000216513 MYLIPQ8WY64 445 aa13.77□□□□□ -0.2
SIX4-201ENST00000216513 PSMG2Q969U7 264 aa13.77□□□□□ -0.2
SIX4-201ENST00000216513 PCDHB3Q9Y5E6 796 aa13.77□□□□□ -0.2
SIX4-201ENST00000216513 ITGBL1O95965 494 aaPredicted RBP13.77□□□□□ -0.21
SIX4-201ENST00000216513 CYP1A1P04798 512 aaPredicted RBP13.77□□□□□ -0.21
SIX4-201ENST00000216513 FLT3P36888 993 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 CCDC142Q17RM4 750 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 ICE2Q659A1 982 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 LUZP2Q86TE4 346 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 ASZ1Q8WWH4 475 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 SLC39A8Q9C0K1 460 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 ADAMTS10Q9H324 1103 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 DLGAP2Q9P1A6 1054 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 RGPD5Q99666 1765 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 A0A096LPK6 155 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 UQCRBP14927 111 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 PIK3CGP48736 1102 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 COPZ1P61923 177 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 BMT2Q1RMZ1 405 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 ADGRF1Q5T601 910 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 LPCAT2Q7L5N7 544 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 CENPLQ8N0S6 344 aaPredicted RBP13.77□□□□□ -0.21
SIX4-201ENST00000216513 ZNF786Q8N393 782 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 POMKQ9H5K3 350 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 SNED1Q8TER0 1413 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 H0YGN5 161 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 AGXTP21549 392 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 ADSLP30566 484 aaPredicted RBP13.77□□□□□ -0.21
SIX4-201ENST00000216513 GJA8P48165 433 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 NTHL1P78549 312 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 RNF44Q7L0R7 432 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 CYP4Z1Q86W10 505 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 GKN2Q86XP6 184 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 PYROXD2Q8N2H3 581 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 CCDC185Q8N715 623 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 ZNF555Q8NEP9 628 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 DDX28Q9NUL7 540 aaKnown RBP13.77□□□□□ -0.21
SIX4-201ENST00000216513 TBC1D30Q9Y2I9 924 aa13.77□□□□□ -0.21
SIX4-201ENST00000216513 RCCD1A6NED2 376 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 CCT8L1PA6NM43 557 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 SYPP08247 313 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 F7P08709 466 aaPredicted RBP13.76□□□□□ -0.21
SIX4-201ENST00000216513 JUPP14923 745 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 PSMC3P17980 439 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 SPIRE1Q08AE8 756 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 CYP2R1Q6VVX0 501 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 ADCK1Q86TW2 530 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 CDK20Q8IZL9 346 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 FUT8Q9BYC5 575 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 SLC2A4RGQ9NR83 387 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 SAC3D1A6NKF1 404 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 TGM5O43548 720 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 SGTAO43765 313 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms