RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 OR51F1A6NGY5 319 aa19.74■□□□□ 0.75
TNFRSF1A-201ENST00000162749 PGLSO95336 258 aa19.74■□□□□ 0.75
TNFRSF1A-201ENST00000162749 ADH5P11766 374 aa19.74■□□□□ 0.75
TNFRSF1A-201ENST00000162749 SULT2A1Q06520 285 aa19.74■□□□□ 0.75
TNFRSF1A-201ENST00000162749 PTPRRQ15256 657 aa19.74■□□□□ 0.75
TNFRSF1A-201ENST00000162749 DLG2Q15700 870 aa19.74■□□□□ 0.75
TNFRSF1A-201ENST00000162749 GEN1Q17RS7 908 aa19.74■□□□□ 0.75
TNFRSF1A-201ENST00000162749 ARMC12Q5T9G4 340 aa19.74■□□□□ 0.75
TNFRSF1A-201ENST00000162749 AHI1Q8N157 1196 aa19.74■□□□□ 0.75
TNFRSF1A-201ENST00000162749 PNPLA1Q8N8W4 532 aa19.74■□□□□ 0.75
TNFRSF1A-201ENST00000162749 MYO19Q96H55 970 aa19.74■□□□□ 0.75
TNFRSF1A-201ENST00000162749 SLCO1B3Q9NPD5 702 aa19.74■□□□□ 0.75
TNFRSF1A-201ENST00000162749 HTRA2O43464 458 aaPredicted RBP19.73■□□□□ 0.75
TNFRSF1A-201ENST00000162749 RPP40O75818 363 aaKnown RBP19.73■□□□□ 0.75
TNFRSF1A-201ENST00000162749 HAUS5O94927 633 aa19.73■□□□□ 0.75
TNFRSF1A-201ENST00000162749 GRIA4P48058 902 aa19.73■□□□□ 0.75
TNFRSF1A-201ENST00000162749 SNRPD1P62314 119 aaKnown RBP19.73■□□□□ 0.75
TNFRSF1A-201ENST00000162749 BCL2L1Q07817 233 aa19.73■□□□□ 0.75
TNFRSF1A-201ENST00000162749 PLCD3Q8N3E9 789 aa19.73■□□□□ 0.75
TNFRSF1A-201ENST00000162749 FITM2Q8N6M3 262 aa19.73■□□□□ 0.75
TNFRSF1A-201ENST00000162749 MYLIPQ8WY64 445 aa19.73■□□□□ 0.75
TNFRSF1A-201ENST00000162749 GRAMD1AQ96CP6 724 aa19.73■□□□□ 0.75
TNFRSF1A-201ENST00000162749 VPS11Q9H270 941 aa19.73■□□□□ 0.75
TNFRSF1A-201ENST00000162749 NLE1Q9NVX2 485 aaPredicted RBP19.73■□□□□ 0.75
TNFRSF1A-201ENST00000162749 KIAA1549LQ6ZVL6 1849 aa19.73■□□□□ 0.75
TNFRSF1A-201ENST00000162749 COL4A3Q01955 1670 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 HEPACAM2A8MVW5 462 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 HOXC11O43248 304 aaPredicted RBP19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 SOCS5O75159 536 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 ADH1CP00326 375 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 FCARP24071 287 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 GMPRP36959 345 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 HADHAP40939 763 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 LEPRP48357 1165 aaKnown RBP19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 CD151P48509 253 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 CSRP3P50461 194 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 EPHB1P54762 984 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 ZNF789Q5FWF6 425 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 MBLAC2Q68D91 279 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 MFSD6LQ8IWD5 586 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 OR4K2Q8NGD2 314 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 GABPB2Q8TAK5 448 aaPredicted RBP19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 PIH1D2Q8WWB5 315 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 EBF3Q9H4W6 596 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 ATP13A3Q9H7F0 1226 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 TRPV4Q9HBA0 871 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 FBXO6Q9NRD1 293 aaPredicted RBP19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 MARCH4Q9P2E8 410 aaPredicted RBP19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 SLC39A10Q9ULF5 831 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 PHTF1Q9UMS5 762 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 CCDC162PA2VCL2 907 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 WDR91A4D1P6 747 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 C2orf81A6NN90 581 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 GLRA3O75311 464 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 GOT2P00505 430 aaKnown RBP19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 SLC4A1P02730 911 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 ARSAP15289 507 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 ABL2P42684 1182 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 ACCSLQ4AC99 568 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 C12orf40Q86WS4 652 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 LMNTD2Q8IXW0 634 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 RYBPQ8N488 228 aaPredicted RBP19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 ARMC2Q8NEN0 867 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 CDKN2AIPNLQ96HQ2 116 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 CEP44Q9C0F1 390 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 KLC4Q9NSK0 619 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 STARD13Q9Y3M8 1113 aa19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 ZNF106Q9H2Y7 1883 aaKnown RBP19.72■□□□□ 0.75
TNFRSF1A-201ENST00000162749 TCF20Q9UGU0 1960 aaKnown RBP19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 OTOL1A6NHN0 477 aaPredicted RBP19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 BNIP3LO60238 219 aa19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 PSMA3P25788 255 aa19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 SERPINB4P48594 390 aa19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 CNSTQ6PJW8 725 aa19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 GALNT7Q86SF2 657 aa19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 DCDC2Q9UHG0 476 aa19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 DENND4AQ7Z401 1863 aa19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 A0A096LPK6 155 aa19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 A0A0U1RQS6 177 aa19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 FAM95CA0A1B0GW59 222 aa19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 C2P06681 752 aa19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 CISD3P0C7P0 127 aa19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 POLR2EP19388 210 aaKnown RBP19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 LPOP22079 712 aaPredicted RBP19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 DGKGP49619 791 aa19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 BNIP1Q12981 228 aa19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 LDB1Q86U70 411 aaPredicted RBP19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 PCDH20Q8N6Y1 951 aaKnown RBP19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 CCDC63Q8NA47 563 aa19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 LRRC8CQ8TDW0 803 aa19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 SORCS1Q8WY21 1168 aa19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 FAM83CQ9BQN1 747 aa19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 OBP2AQ9NY56 170 aa19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 HACD3Q9P035 362 aa19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 EMCNQ9ULC0 261 aa19.71■□□□□ 0.75
TNFRSF1A-201ENST00000162749 EDF1O60869 148 aaKnown RBP19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 GSRP00390 522 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 ALPIP09923 528 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 CTPS1P17812 591 aa19.7■□□□□ 0.74
TNFRSF1A-201ENST00000162749 SERPINA4P29622 427 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms