RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 MTF2Q9Y483 593 aaPredicted RBP18.88■□□□□ 0.61
MBD3-201ENST00000156825 TRIM43BA6NCK2 446 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 ZNF37AP17032 561 aaPredicted RBP18.87■□□□□ 0.61
MBD3-201ENST00000156825 POMGNT2Q8NAT1 580 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 ATL1Q8WXF7 558 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 DTNBP1Q96EV8 351 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 TSC22D4Q9Y3Q8 395 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 RAI2Q9Y5P3 530 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 EME2A4GXA9 379 aaPredicted RBP18.87■□□□□ 0.61
MBD3-201ENST00000156825 OTCP00480 354 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 FYNP06241 537 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 SLC7A2P52569 658 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 LSM3P62310 102 aaKnown RBP18.87■□□□□ 0.61
MBD3-201ENST00000156825 VWA5B1Q5TIE3 1220 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 PRSS55Q6UWB4 352 aaPredicted RBP18.87■□□□□ 0.61
MBD3-201ENST00000156825 HMGXB4Q9UGU5 601 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 TRAF6Q9Y4K3 522 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 POLR3HQ9Y535 204 aaPredicted RBP18.87■□□□□ 0.61
MBD3-201ENST00000156825 FAM47E-STBD1D6RA91 191 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 CAPN15O75808 1086 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 RNASEH2BQ5TBB1 312 aaKnown RBP18.87■□□□□ 0.61
MBD3-201ENST00000156825 VSTM1Q6UX27 236 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 GET4Q7L5D6 327 aaPredicted RBP18.87■□□□□ 0.61
MBD3-201ENST00000156825 SLC26A9Q7LBE3 791 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.87■□□□□ 0.61
MBD3-201ENST00000156825 KBTBD2Q8IY47 623 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 RBFAQ8N0V3 343 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 LRRC57Q8N9N7 239 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 DBF4BQ8NFT6 615 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 SCAMP5Q8TAC9 235 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 RPL10LQ96L21 214 aaKnown RBP18.87■□□□□ 0.61
MBD3-201ENST00000156825 PPP3R2Q96LZ3 170 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 KCNE2Q9Y6J6 123 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 FTH1P02794 183 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 SLC35G4P0C7Q5 338 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 CUZD1Q86UP6 607 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 GPR180Q86V85 440 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 GSTCDQ8NEC7 633 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 UPF1Q92900 1129 aaKnown RBP eCLIP18.87■□□□□ 0.612e-7■■■■■ 50.7
MBD3-201ENST00000156825 RHOBTB2Q9BYZ6 727 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 PAPOLBQ9NRJ5 636 aaKnown RBP18.87■□□□□ 0.61
MBD3-201ENST00000156825 PSME2Q9UL46 239 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 YJEFN3A6XGL0 299 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 CLDN11O75508 207 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 RECQL5O94762 991 aaPredicted RBP18.87■□□□□ 0.61
MBD3-201ENST00000156825 BPGMP07738 259 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 NRLP54845 237 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 FUT10Q6P4F1 479 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 ZCCHC7Q8N3Z6 543 aaKnown RBP18.87■□□□□ 0.61
MBD3-201ENST00000156825 ZNF398Q8TD17 642 aa18.87■□□□□ 0.61
MBD3-201ENST00000156825 MYO9BQ13459 2157 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 SGTAO43765 313 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 AQP1P29972 269 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 GPAT3Q53EU6 434 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 UBE2R2Q712K3 238 aaPredicted RBP18.86■□□□□ 0.61
MBD3-201ENST00000156825 CLYBLQ8N0X4 340 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 SLC44A1Q8WWI5 657 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 FERD3LQ96RJ6 166 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 TLE6Q9H808 572 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 NEURL4Q96JN8 1562 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 WBP4O75554 376 aaKnown RBP18.86■□□□□ 0.61
MBD3-201ENST00000156825 TACR2P21452 398 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 PRKCZQ05513 592 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 KRT73Q86Y46 540 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 DAW1Q8N136 415 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 ZNF567Q8N184 647 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 SCLYQ96I15 445 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 ATAD3AQ9NVI7 634 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 ARL8BQ9NVJ2 186 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 KIAA1522Q9P206 1035 aaPredicted RBP18.86■□□□□ 0.61
MBD3-201ENST00000156825 NOCTQ9UK39 431 aaKnown RBP18.86■□□□□ 0.61
MBD3-201ENST00000156825 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.86■□□□□ 0.61
MBD3-201ENST00000156825 TSC22D2O75157 780 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 TKTP29401 623 aaKnown RBP18.86■□□□□ 0.61
MBD3-201ENST00000156825 ICAM3P32942 547 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 TALDO1P37837 337 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 HECTD2Q5U5R9 776 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 RASAL3Q86YV0 1011 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 ADHFE1Q8IWW8 467 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 OR52E6Q96RD3 313 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 NMUR2Q9GZQ4 415 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 HDHD2Q9H0R4 259 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 U3KQV3 271 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 ARMCX4Q5H9R4 360 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 RSBN1Q5VWQ0 802 aaPredicted RBP18.86■□□□□ 0.61
MBD3-201ENST00000156825 GK5Q6ZS86 529 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 FAM20CQ8IXL6 584 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 ARL14EPQ8N8R7 260 aaPredicted RBP18.86■□□□□ 0.61
MBD3-201ENST00000156825 ATG10Q9H0Y0 220 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 COPG2Q9UBF2 871 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 KLHL3Q9UH77 587 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 TPRKBQ9Y3C4 175 aa18.86■□□□□ 0.61
MBD3-201ENST00000156825 TSHRP16473 764 aa18.85■□□□□ 0.61
MBD3-201ENST00000156825 MYL12AP19105 171 aa18.85■□□□□ 0.61
MBD3-201ENST00000156825 CA9Q16790 459 aa18.85■□□□□ 0.61
MBD3-201ENST00000156825 OFCC1Q8IZS5 231 aa18.85■□□□□ 0.61
MBD3-201ENST00000156825 C12orf50Q8NA57 414 aaPredicted RBP18.85■□□□□ 0.61
MBD3-201ENST00000156825 CAPNS2Q96L46 248 aa18.85■□□□□ 0.61
MBD3-201ENST00000156825 MYL12BO14950 172 aa18.85■□□□□ 0.61
MBD3-201ENST00000156825 NDUFS2O75306 463 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms