RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 PbsnO08976 174 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 EomesO54839 707 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ldb2O55203 373 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Cyp8b1O88962 500 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 P01807 119 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Tcf3P15806 651 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Rfx2P48379 717 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Fam207aP58468 219 aaKnown RBP8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ntsr2P70310 416 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gbp8Q2V6D6 525 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Pgap2Q3TQR0 254 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 CblbQ3TTA7 982 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Q3UY34 256 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Snx31Q6P8Y7 439 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ssx9Q6XAS3 170 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Disc1Q811T9 852 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Timm29Q8BGX2 266 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Elp6Q8BK75 266 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 AgmoQ8BS35 447 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Arhgap25Q8BYW1 648 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Slco6c1Q8C0X7 706 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Sirt5Q8K2C6 310 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Cd207Q8VBX4 331 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Olfr846Q8VET8 312 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Pycr2Q922Q4 320 aaKnown RBP8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 CatsperzQ9CQP8 194 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Tspan11Q9D1D1 253 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ten1Q9D7K2 161 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Kdelc1Q9JHP7 502 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Asb4Q9WV71 426 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ccdc149F6V035 524 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gm42641I6L9G2 585 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Cd4P06332 457 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Dnmt3cP0DOY1 709 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Traf2P39429 501 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Bcl6P41183 707 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gabrb3P63080 473 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 LchnQ3UHG7 455 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Armc7Q3UJZ3 198 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Zfp560Q3URI6 754 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ermp1Q3UVK0 898 aaKnown RBP8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Abl2Q4JIM5 1182 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Heatr9Q5QNV8 569 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 ScinQ60604 715 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ip6k1Q6PD10 433 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Cspg5Q71M36 566 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Nup93Q8BJ71 819 aaKnown RBP8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 AtripQ8BMG1 785 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Washc5Q8C2E7 1159 aaKnown RBP8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Btbd9Q8C726 612 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Osbpl1aQ91XL9 950 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Stard13Q923Q2 1113 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Slc7a9Q9QXA6 487 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Nphs1Q9QZS7 1256 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Eml5Q8BQM8 1977 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gm13283A0A087WPG5 182 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Sppl2cA2A6C4 690 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Armt1A6H630 439 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gm20828J3KMI7 228 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Sypl1O09117 261 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Smad6O35182 495 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Pou2f3P31362 431 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Polr3bP59470 1133 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Tmem207P86045 143 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Col6a2Q02788 1034 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Zbtb48Q1H9T6 681 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Brsk1Q5RJI5 778 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Arcn1Q5XJY5 511 aaKnown RBP8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Klra4Q60651 263 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 CpQ61147 1061 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 MelkQ61846 643 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Fam167aQ6P1G6 215 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Defb14Q7TNV9 67 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 4932411N23RikQ8C0S0 470 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 NemfQ8CCP0 1064 aaKnown RBP8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Vps37cQ8R105 352 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Vmn1r214Q8R279 367 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Lrrc8cQ8R502 803 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Wdr74Q8VCG3 384 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Mtfr2Q8VED8 361 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ndufs2Q91WD5 463 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 AdprmQ99KS6 340 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Tex46Q9CPU3 165 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Tmem81Q9D5K1 259 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Pcm1Q9R0L6 2025 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Smok3aC0HKC8 504 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Smok3bC0HKC9 504 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gm8108K7N734 216 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gm3187M0QWW3 260 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Cyp2b19O55071 492 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 PfklP12382 780 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Cyr61P18406 379 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ces1cP23953 554 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 PtpaP58389 323 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Snrpd1P62315 119 aaKnown RBP8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Tmprss9P69525 1065 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Mtf2Q02395 593 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Zmym5Q3U2E2 627 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Mif4gdQ3UBZ5 222 aa8.73□□□□□ -1.01
Trim39-201ENSMUST00000042717 Lrrc8bQ5DU41 803 aa8.73□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms