RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 PPHLN1Q8NEY8 458 aaKnown RBP17.55■□□□□ 0.4
PHGDH-230ENST00000641927 HCAR2Q8TDS4 363 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 AENQ8WTP8 325 aaKnown RBP17.55■□□□□ 0.4
PHGDH-230ENST00000641927 PYROXD1Q8WU10 500 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 HMGB4Q8WW32 186 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 STAMBPL1Q96FJ0 436 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 ARGLU1Q9NWB6 273 aaPredicted RBP17.55■□□□□ 0.4
PHGDH-230ENST00000641927 SPO11Q9Y5K1 396 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 TSPAN11A1L157 253 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 CCDC151A5D8V7 595 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 PDGFBP01127 241 aaPredicted RBP17.55■□□□□ 0.4
PHGDH-230ENST00000641927 C5AR1P21730 350 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 NFKBIAP25963 317 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 DGKEP52429 567 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 PCID2Q5JVF3 399 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 KIAA1324Q6UXG2 1013 aaKnown RBP17.55■□□□□ 0.4
PHGDH-230ENST00000641927 ERN2Q76MJ5 926 aaKnown RBP17.55■□□□□ 0.4
PHGDH-230ENST00000641927 GLT6D1Q7Z4J2 308 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 PGBD3Q8N328 593 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 HDDC3Q8N4P3 179 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 LRRC39Q96DD0 335 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 SIPA1Q96FS4 1042 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 CFAP36Q96G28 342 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 SIGLEC10Q96LC7 697 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 C9orf72Q96LT7 481 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 PHACTR1Q9C0D0 580 aa17.55■□□□□ 0.4
PHGDH-230ENST00000641927 BCCIPQ9P287 314 aaKnown RBP eCLIP17.55■□□□□ 0.4
PHGDH-230ENST00000641927 A0A0U1RQS6 177 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 CAPN8A6NHC0 703 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 RNASEH2AO75792 299 aaKnown RBP17.54■□□□□ 0.4
PHGDH-230ENST00000641927 ACADMP11310 421 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 ADRA1DP25100 572 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 NEK3P51956 506 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 CNTN1Q12860 1018 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 ERAP2Q6P179 960 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 CAPN12Q6ZSI9 719 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 TMC3Q7Z5M5 1100 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 IGDCC3Q8IVU1 814 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 PALM2Q8IXS6 379 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 TSTD1Q8NFU3 115 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 BRSK1Q8TDC3 778 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 SPOCK2Q92563 424 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 CLDN23Q96B33 292 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 SCRN2Q96FV2 425 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 MRGPRX1Q96LB2 322 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 EBNA1BP2Q99848 306 aaKnown RBP17.54■□□□□ 0.4
PHGDH-230ENST00000641927 OMDQ99983 421 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 GPR63Q9BZJ6 419 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 CHRDQ9H2X0 955 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 MAGEE1Q9HCI5 957 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 CD248Q9HCU0 757 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 PCDH12Q9NPG4 1184 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 CHRAC1Q9NRG0 131 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 C2orf42Q9NWW7 574 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.54■□□□□ 0.42e-10■□□□□ 9.2
PHGDH-230ENST00000641927 ZC3H7BQ9UGR2 993 aaKnown RBP17.54■□□□□ 0.4
PHGDH-230ENST00000641927 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.54■□□□□ 0.4
PHGDH-230ENST00000641927 TEX264Q9Y6I9 313 aa17.54■□□□□ 0.4
PHGDH-230ENST00000641927 A0A0C4DFX4 3053 aa17.53■□□□□ 0.4
PHGDH-230ENST00000641927 C1orf232A0A0U1RR37 186 aa17.53■□□□□ 0.4
PHGDH-230ENST00000641927 A0A1W2PP55 124 aa17.53■□□□□ 0.4
PHGDH-230ENST00000641927 HEATR9A2RTY3 570 aa17.53■□□□□ 0.4
PHGDH-230ENST00000641927 NPIPB15A6NHN6 443 aaPredicted RBP17.53■□□□□ 0.4
PHGDH-230ENST00000641927 BUD23O43709 281 aaKnown RBP17.53■□□□□ 0.4
PHGDH-230ENST00000641927 CRTAMO95727 393 aa17.53■□□□□ 0.4
PHGDH-230ENST00000641927 ADRB3P13945 408 aa17.53■□□□□ 0.4
PHGDH-230ENST00000641927 NDUFV2P19404 249 aa17.53■□□□□ 0.4
PHGDH-230ENST00000641927 P2RY2P41231 377 aa17.53■□□□□ 0.4
PHGDH-230ENST00000641927 PMS2P54278 862 aa17.53■□□□□ 0.4
PHGDH-230ENST00000641927 TTC31Q49AM3 519 aaPredicted RBP17.53■□□□□ 0.4
PHGDH-230ENST00000641927 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.53■□□□□ 0.4
PHGDH-230ENST00000641927 AADATQ8N5Z0 425 aa17.53■□□□□ 0.4
PHGDH-230ENST00000641927 HHIPQ96QV1 700 aa17.53■□□□□ 0.4
PHGDH-230ENST00000641927 WDR83Q9BRX9 315 aaKnown RBP17.53■□□□□ 0.4
PHGDH-230ENST00000641927 TRIM56Q9BRZ2 755 aaKnown RBP17.53■□□□□ 0.4
PHGDH-230ENST00000641927 HDAC8Q9BY41 377 aa17.53■□□□□ 0.4
PHGDH-230ENST00000641927 PABPC3Q9H361 631 aaKnown RBP17.53■□□□□ 0.4
PHGDH-230ENST00000641927 CDC42EP4Q9H3Q1 356 aaKnown RBP17.53■□□□□ 0.4
PHGDH-230ENST00000641927 FBXL12Q9NXK8 326 aa17.53■□□□□ 0.4
PHGDH-230ENST00000641927 HACD3Q9P035 362 aa17.53■□□□□ 0.4
PHGDH-230ENST00000641927 B4GALT6Q9UBX8 382 aa17.53■□□□□ 0.4
PHGDH-230ENST00000641927 ZNF711Q9Y462 761 aa17.53■□□□□ 0.4
PHGDH-230ENST00000641927 TCAF1Q9Y4C2 921 aa17.53■□□□□ 0.4
PHGDH-230ENST00000641927 ARL5AQ9Y689 179 aa17.53■□□□□ 0.4
PHGDH-230ENST00000641927 MAGEB16A2A368 324 aa17.52■□□□□ 0.4
PHGDH-230ENST00000641927 C2orf81A6NN90 581 aa17.52■□□□□ 0.4
PHGDH-230ENST00000641927 NEMP1O14524 444 aa17.52■□□□□ 0.4
PHGDH-230ENST00000641927 AURKAO14965 403 aa17.52■□□□□ 0.4
PHGDH-230ENST00000641927 CYP2A6P11509 494 aaPredicted RBP17.52■□□□□ 0.4
PHGDH-230ENST00000641927 GABRG2P18507 467 aa17.52■□□□□ 0.4
PHGDH-230ENST00000641927 PGAM1P18669 254 aa17.52■□□□□ 0.4
PHGDH-230ENST00000641927 RPS9P46781 194 aaKnown RBP17.52■□□□□ 0.4
PHGDH-230ENST00000641927 MTAPQ13126 283 aa17.52■□□□□ 0.4
PHGDH-230ENST00000641927 MSLNQ13421 630 aaPredicted RBP17.52■□□□□ 0.4
PHGDH-230ENST00000641927 ARHGEF7Q14155 803 aa17.52■□□□□ 0.4
PHGDH-230ENST00000641927 KYNUQ16719 465 aa17.52■□□□□ 0.4
PHGDH-230ENST00000641927 ANO7Q6IWH7 933 aa17.52■□□□□ 0.4
PHGDH-230ENST00000641927 CES3Q6UWW8 571 aa17.52■□□□□ 0.4
PHGDH-230ENST00000641927 LYSMD3Q7Z3D4 306 aa17.52■□□□□ 0.4
PHGDH-230ENST00000641927 SPEM1Q8N4L4 309 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms