RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 ANKRD27Q96NW4 1050 aa15.18■□□□□ 0.02
TRIM3-215ENST00000639856 GPR78Q96P69 363 aa15.18■□□□□ 0.02
TRIM3-215ENST00000639856 RAD9AQ99638 391 aa15.18■□□□□ 0.02
TRIM3-215ENST00000639856 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.18■□□□□ 0.02
TRIM3-215ENST00000639856 MAFFQ9ULX9 164 aa15.18■□□□□ 0.02
TRIM3-215ENST00000639856 RAP2CQ9Y3L5 183 aa15.18■□□□□ 0.02
TRIM3-215ENST00000639856 MUSKO15146 869 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 PAPSS2O95340 614 aaPredicted RBP15.17■□□□□ 0.02
TRIM3-215ENST00000639856 CHRNGP07510 517 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 GLDCP23378 1020 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 HOXD9P28356 352 aaPredicted RBP15.17■□□□□ 0.02
TRIM3-215ENST00000639856 CPOXP36551 454 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 HK2P52789 917 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 CDH4P55283 916 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 POU4F1Q01851 419 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 GNA12Q03113 381 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 TSNAXIP1Q2TAA8 658 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 METTL21CQ5VZV1 264 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 PSRC1Q6PGN9 363 aaPredicted RBP15.17■□□□□ 0.02
TRIM3-215ENST00000639856 TMC8Q8IU68 726 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.17■□□□□ 0.02
TRIM3-215ENST00000639856 GPATCH11Q8N954 259 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 GABPB2Q8TAK5 448 aaPredicted RBP15.17■□□□□ 0.02
TRIM3-215ENST00000639856 SLC22A17Q8WUG5 538 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 NXNL1Q96CM4 212 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 THTPAQ9BU02 230 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 LRRC3Q9BY71 257 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 PDFQ9HBH1 243 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 XPR1Q9UBH6 696 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 RANBP2P49792 3224 aaKnown RBP15.17■□□□□ 0.02
TRIM3-215ENST00000639856 A0A087X1B8 175 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 GREM1O60565 184 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 ARHGEF15O94989 841 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 LRG1P02750 347 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 ADH1AP07327 375 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 HDCP19113 662 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 NCF2P19878 526 aaPredicted RBP15.17■□□□□ 0.02
TRIM3-215ENST00000639856 PTDSS1P48651 473 aaKnown RBP15.17■□□□□ 0.02
TRIM3-215ENST00000639856 COPAP53621 1224 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 NAGLUP54802 743 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 SLC12A2P55011 1212 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 DLG1Q12959 904 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 LBRQ14739 615 aaKnown RBP15.17■□□□□ 0.02
TRIM3-215ENST00000639856 SLC9B1Q4ZJI4 515 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 CNSTQ6PJW8 725 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 ULK2Q8IYT8 1036 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 KREMEN2Q8NCW0 462 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 GIMAP7Q8NHV1 300 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 ARRDC2Q8TBH0 407 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 MAPK15Q8TD08 544 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 SSX2IPQ9Y2D8 614 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 CPQQ9Y646 472 aa15.17■□□□□ 0.02
TRIM3-215ENST00000639856 F8W8V4 182 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 MATN2O00339 956 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 AURKAO14965 403 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 DLX3O60479 287 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 PSMG1O95456 288 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 OLFM2O95897 454 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 MPSTP25325 297 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 BMPR1AP36894 532 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 LEPRP48357 1165 aaKnown RBP15.16■□□□□ 0.02
TRIM3-215ENST00000639856 RPL14P50914 215 aaKnown RBP15.16■□□□□ 0.02
TRIM3-215ENST00000639856 RCN1Q15293 331 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 ARL13AQ5H913 290 aaPredicted RBP15.16■□□□□ 0.02
TRIM3-215ENST00000639856 FSCBQ5H9T9 825 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 IL31Q6EBC2 164 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 NET1Q7Z628 596 aaPredicted RBP15.16■□□□□ 0.02
TRIM3-215ENST00000639856 MAB21L3Q8N8X9 362 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 OR13J1Q8NGT2 312 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 AGR3Q8TD06 166 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 HERVK_113Q902F9 699 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 STMN2Q93045 179 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 CMTM5Q96DZ9 223 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 MOCOSQ96EN8 888 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 ZNF570Q96NI8 536 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 OMDQ99983 421 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 C17orf80Q9BSJ5 609 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 SPON2Q9BUD6 331 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 MRPL46Q9H2W6 279 aaKnown RBP15.16■□□□□ 0.02
TRIM3-215ENST00000639856 MAN1C1Q9NR34 630 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 STOML1Q9UBI4 398 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 STK39Q9UEW8 545 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 CDH23Q9H251 3354 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 LOC285095A0A1B0GVY8 99 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 MROH6A6NGR9 719 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 HDAC3O15379 428 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 CCL16O15467 120 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 CLDN11O75508 207 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 KRT36O76013 467 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 PIGNO95427 931 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 MYOGP15173 224 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 KPNA2P52292 529 aaKnown RBP15.16■□□□□ 0.02
TRIM3-215ENST00000639856 PRKAA1Q13131 559 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 SIRPB2Q5JXA9 342 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 TMCO4Q5TGY1 634 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 POU5F2Q8N7G0 328 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 MAGEH1Q9H213 219 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 TCF7L2Q9NQB0 619 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 LRRC42Q9Y546 428 aa15.16■□□□□ 0.02
TRIM3-215ENST00000639856 A0A1W2PRU2 124 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms