RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 BTBD6Q96KE9 485 aa12.78□□□□□ -0.36
CTSD-208ENST00000636843 APOLD1Q96LR9 279 aa12.78□□□□□ -0.36
CTSD-208ENST00000636843 ZNF578Q96N58 590 aaPredicted RBP12.78□□□□□ -0.36
CTSD-208ENST00000636843 FCRL3Q96P31 734 aaPredicted RBP12.78□□□□□ -0.36
CTSD-208ENST00000636843 LENG8Q96PV6 779 aaPredicted RBP12.78□□□□□ -0.36
CTSD-208ENST00000636843 PARVAQ9NVD7 372 aa12.78□□□□□ -0.36
CTSD-208ENST00000636843 DNAJC28Q9NX36 388 aa12.78□□□□□ -0.36
CTSD-208ENST00000636843 AMACRQ9UHK6 382 aa12.78□□□□□ -0.36
CTSD-208ENST00000636843 CSNK1G3Q9Y6M4 447 aa12.78□□□□□ -0.36
CTSD-208ENST00000636843 SPTY2D1-AS1A0A0U1RR47 76 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 POM121BA6NF01 834 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 H3BM21 787 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 GOLGA8SH3BPF8 625 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 K7ESM1 405 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 TSPAN6O43657 245 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 PROSCO94903 275 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 PAK4O96013 591 aaPredicted RBP12.77□□□□□ -0.37
CTSD-208ENST00000636843 MMP8P22894 467 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 MAN1A1P33908 653 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 MARCKSL1P49006 195 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 CCNHP51946 323 aaPredicted RBP12.77□□□□□ -0.37
CTSD-208ENST00000636843 GEMIN4P57678 1058 aaKnown RBP12.77□□□□□ -0.37
CTSD-208ENST00000636843 ARF5P84085 180 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 NRG1Q02297 640 aaPredicted RBP12.77□□□□□ -0.37
CTSD-208ENST00000636843 TLE3Q04726 772 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 C19orf57Q0VDD7 668 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 SGCGQ13326 291 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 FZD2Q14332 565 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 TRNP1Q6NT89 227 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 GPR155Q7Z3F1 870 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 FAM131BQ86XD5 332 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 SLC13A5Q86YT5 568 aaPredicted RBP12.77□□□□□ -0.37
CTSD-208ENST00000636843 LSMEM2Q8N112 164 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 GOLGA6L1Q8N7Z2 621 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 ASB12Q8WXK4 309 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 RAB7BQ96AH8 199 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 CFAP57Q96MR6 1250 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 GDAP1L1Q96MZ0 367 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 C11orf70Q9BRQ4 267 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 NCKIPSDQ9NZQ3 722 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 IPO11Q9UI26 975 aaKnown RBP12.77□□□□□ -0.37
CTSD-208ENST00000636843 PCDHB1Q9Y5F3 818 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 TRPM6Q9BX84 2022 aa12.77□□□□□ -0.37
CTSD-208ENST00000636843 LY6G6EA0A0G2JKS1 128 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 TEX51A0A1B0GUA7 166 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 ESYT3A0FGR9 886 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 ZSCAN5CA6NGD5 496 aaPredicted RBP12.76□□□□□ -0.37
CTSD-208ENST00000636843 FPGTO14772 594 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 PSTPIP1O43586 416 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 DXOO77932 396 aaKnown RBP12.76□□□□□ -0.37
CTSD-208ENST00000636843 CSF2P04141 144 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 PYGMP11217 842 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 NME1P15531 152 aaKnown RBP12.76□□□□□ -0.37
CTSD-208ENST00000636843 LSSP48449 732 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 MAPKAPK2P49137 400 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 DR1Q01658 176 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 MAMLD1Q13495 774 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 HLTFQ14527 1009 aaKnown RBP eCLIP12.76□□□□□ -0.37
CTSD-208ENST00000636843 CYP1B1Q16678 543 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 ARL13BQ3SXY8 428 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 C2CD6Q53TS8 623 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 ZNF542PQ5EBM4 170 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 ZCCHC8Q6NZY4 707 aaKnown RBP12.76□□□□□ -0.37
CTSD-208ENST00000636843 PARS2Q7L3T8 475 aaKnown RBP12.76□□□□□ -0.37
CTSD-208ENST00000636843 PARGQ86W56 976 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 SPACA3Q8IXA5 215 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 ZNF248Q8NDW4 579 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 DENND6BQ8NEG7 585 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 ZNF548Q8NEK5 533 aaPredicted RBP12.76□□□□□ -0.37
CTSD-208ENST00000636843 LRRC45Q96CN5 670 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 RUFY1Q96T51 708 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 C1QTNF2Q9BXJ5 285 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 ABCG4Q9H172 646 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 OSBPL2Q9H1P3 480 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 ZDHHC6Q9H6R6 413 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 OR12D3Q9UGF7 316 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 PCYOX1Q9UHG3 505 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 FCF1Q9Y324 198 aaKnown RBP12.76□□□□□ -0.37
CTSD-208ENST00000636843 U3KQA8 63 aa12.76□□□□□ -0.37
CTSD-208ENST00000636843 IGLON5A6NGN9 336 aa12.75□□□□□ -0.37
CTSD-208ENST00000636843 C16orf96A6NNT2 1141 aa12.75□□□□□ -0.37
CTSD-208ENST00000636843 RAD51BO15315 384 aa12.75□□□□□ -0.37
CTSD-208ENST00000636843 TTI1O43156 1089 aa12.75□□□□□ -0.37
CTSD-208ENST00000636843 LZTS3O60299 673 aaPredicted RBP12.75□□□□□ -0.37
CTSD-208ENST00000636843 SYF2O95926 243 aaKnown RBP12.75□□□□□ -0.37
CTSD-208ENST00000636843 CD160O95971 181 aa12.75□□□□□ -0.37
CTSD-208ENST00000636843 RHOQP17081 205 aa12.75□□□□□ -0.37
CTSD-208ENST00000636843 ADRA1BP35368 520 aa12.75□□□□□ -0.37
CTSD-208ENST00000636843 ACVRL1P37023 503 aa12.75□□□□□ -0.37
CTSD-208ENST00000636843 HSPA9P38646 679 aaKnown RBP12.75□□□□□ -0.37
CTSD-208ENST00000636843 DRG2P55039 364 aaKnown RBP12.75□□□□□ -0.37
CTSD-208ENST00000636843 PCBP4P57723 403 aaKnown RBP12.75□□□□□ -0.37
CTSD-208ENST00000636843 ERVPABLB-1P60509 514 aa12.75□□□□□ -0.37
CTSD-208ENST00000636843 ATP11AP98196 1134 aa12.75□□□□□ -0.37
CTSD-208ENST00000636843 ZNF805Q5CZA5 627 aa12.75□□□□□ -0.37
CTSD-208ENST00000636843 MANEALQ5VSG8 457 aa12.75□□□□□ -0.37
CTSD-208ENST00000636843 GRAMD1AQ96CP6 724 aa12.75□□□□□ -0.37
CTSD-208ENST00000636843 HIC2Q96JB3 615 aa12.75□□□□□ -0.37
CTSD-208ENST00000636843 LGMNQ99538 433 aa12.75□□□□□ -0.37
CTSD-208ENST00000636843 KLF6Q99612 283 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms