RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 DHX9Q08211 1270 aaKnown RBP16.68■□□□□ 0.26
CCNA1-203ENST00000625767 DMWDQ09019 674 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 CDH17Q12864 832 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 PTPRCAPQ14761 206 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 UBAP2Q5T6F2 1119 aaKnown RBP16.68■□□□□ 0.26
CCNA1-203ENST00000625767 BRAT1Q6PJG6 821 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.68■□□□□ 0.26
CCNA1-203ENST00000625767 ERN2Q76MJ5 926 aaKnown RBP16.68■□□□□ 0.26
CCNA1-203ENST00000625767 FAM124AQ86V42 546 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 IGDCC3Q8IVU1 814 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 PGBD3Q8N328 593 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 FRMD1Q8N878 549 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 BLOC1S5Q8TDH9 187 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 PBXIP1Q96AQ6 731 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 ADGRE3Q9BY15 652 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 PABPC3Q9H361 631 aaKnown RBP16.68■□□□□ 0.26
CCNA1-203ENST00000625767 FBXL12Q9NXK8 326 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 DKK3Q9UBP4 350 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 B4GALT6Q9UBX8 382 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 PHTF1Q9UMS5 762 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 KCTD3Q9Y597 815 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 TRPM6Q9BX84 2022 aa16.67■□□□□ 0.26
CCNA1-203ENST00000625767 K7ESF4 209 aa16.67■□□□□ 0.26
CCNA1-203ENST00000625767 BBS9Q3SYG4 887 aa16.67■□□□□ 0.26
CCNA1-203ENST00000625767 FAM46CQ5VWP2 391 aa16.67■□□□□ 0.26
CCNA1-203ENST00000625767 FBXL19Q6PCT2 694 aa16.67■□□□□ 0.26
CCNA1-203ENST00000625767 LINC00523Q86TU6 105 aa16.67■□□□□ 0.26
CCNA1-203ENST00000625767 CCDC25Q86WR0 208 aa16.67■□□□□ 0.26
CCNA1-203ENST00000625767 ZCCHC9Q8N567 271 aaKnown RBP16.67■□□□□ 0.26
CCNA1-203ENST00000625767 GPR161Q8N6U8 529 aaKnown RBP16.67■□□□□ 0.26
CCNA1-203ENST00000625767 BBOF1Q8ND07 529 aa16.67■□□□□ 0.26
CCNA1-203ENST00000625767 EID2BQ96D98 161 aa16.67■□□□□ 0.26
CCNA1-203ENST00000625767 ZNF778Q96MU6 729 aa16.67■□□□□ 0.26
CCNA1-203ENST00000625767 FBRSQ9HAH7 460 aa16.67■□□□□ 0.26
CCNA1-203ENST00000625767 DYRK4Q9NR20 520 aa16.67■□□□□ 0.26
CCNA1-203ENST00000625767 BCCIPQ9P287 314 aaKnown RBP eCLIP16.67■□□□□ 0.26
CCNA1-203ENST00000625767 PPIL1Q9Y3C6 166 aa16.67■□□□□ 0.26
CCNA1-203ENST00000625767 ARL5AQ9Y689 179 aa16.67■□□□□ 0.26
CCNA1-203ENST00000625767 CUL9Q8IWT3 2517 aa16.67■□□□□ 0.26
CCNA1-203ENST00000625767 CAPN8A6NHC0 703 aa16.66■□□□□ 0.26
CCNA1-203ENST00000625767 CTIFO43310 598 aaKnown RBP16.66■□□□□ 0.26
CCNA1-203ENST00000625767 TNNT3P45378 269 aaPredicted RBP16.66■□□□□ 0.26
CCNA1-203ENST00000625767 CLCN5P51795 746 aa16.66■□□□□ 0.26
CCNA1-203ENST00000625767 NEK3P51956 506 aa16.66■□□□□ 0.26
CCNA1-203ENST00000625767 FAM193AP78312 1265 aa16.66■□□□□ 0.26
CCNA1-203ENST00000625767 CUL1Q13616 776 aa16.66■□□□□ 0.26
CCNA1-203ENST00000625767 HIF1AQ16665 826 aa16.66■□□□□ 0.26
CCNA1-203ENST00000625767 LYSMD3Q7Z3D4 306 aa16.66■□□□□ 0.26
CCNA1-203ENST00000625767 ANKMY2Q8IV38 441 aa16.66■□□□□ 0.26
CCNA1-203ENST00000625767 GANCQ8TET4 914 aa16.66■□□□□ 0.26
CCNA1-203ENST00000625767 SPOCK2Q92563 424 aa16.66■□□□□ 0.26
CCNA1-203ENST00000625767 SCRN2Q96FV2 425 aa16.66■□□□□ 0.26
CCNA1-203ENST00000625767 PPP1R16AQ96I34 528 aa16.66■□□□□ 0.26
CCNA1-203ENST00000625767 SIGLEC10Q96LC7 697 aa16.66■□□□□ 0.26
CCNA1-203ENST00000625767 MCCC1Q96RQ3 725 aaPredicted RBP16.66■□□□□ 0.26
CCNA1-203ENST00000625767 HDAC8Q9BY41 377 aa16.66■□□□□ 0.26
CCNA1-203ENST00000625767 C11orf16Q9NQ32 467 aa16.66■□□□□ 0.26
CCNA1-203ENST00000625767 SPATA6Q9NWH7 488 aaPredicted RBP16.66■□□□□ 0.26
CCNA1-203ENST00000625767 KMT2EQ8IZD2 1858 aa16.66■□□□□ 0.26
CCNA1-203ENST00000625767 LAMA1P25391 3075 aa16.66■□□□□ 0.26
CCNA1-203ENST00000625767 CLDN7O95471 211 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 C7P10643 843 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 CXCL12P48061 93 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 TPMTP51580 245 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 TUBB4BP68371 445 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 RALGDSQ12967 914 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 PDIA2Q13087 525 aaKnown RBP16.65■□□□□ 0.26
CCNA1-203ENST00000625767 SEPT6Q14141 434 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 CDKN3Q16667 212 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 CRTC1Q6UUV9 634 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 CES3Q6UWW8 571 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 CCNI2Q6ZMN8 369 aaPredicted RBP16.65■□□□□ 0.26
CCNA1-203ENST00000625767 RFLNAQ6ZTI6 216 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 FAM160A2Q8N612 972 aaPredicted RBP16.65■□□□□ 0.26
CCNA1-203ENST00000625767 RLN3Q8WXF3 142 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 FMO2Q99518 471 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 OMDQ99983 421 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 WRAP53Q9BUR4 548 aaKnown RBP16.65■□□□□ 0.26
CCNA1-203ENST00000625767 XAB2Q9HCS7 855 aaKnown RBP16.65■□□□□ 0.26
CCNA1-203ENST00000625767 FRYLO94915 3013 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 PRR23AA6NEV1 266 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 TNFRSF10AO00220 468 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 CCL22O00626 93 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 AREL1O15033 823 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 ACADMP11310 421 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 MLNP12872 115 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 XPAP23025 273 aaPredicted RBP16.65■□□□□ 0.26
CCNA1-203ENST00000625767 TNFRSF8P28908 595 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 ACSL1P33121 698 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 MMP12P39900 470 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 RPL26P61254 145 aaKnown RBP16.65■□□□□ 0.26
CCNA1-203ENST00000625767 SARNPP82979 210 aaKnown RBP16.65■□□□□ 0.26
CCNA1-203ENST00000625767 SMAD1Q15797 465 aaKnown RBP16.65■□□□□ 0.26
CCNA1-203ENST00000625767 WDR93Q6P2C0 686 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 RASSF3Q86WH2 238 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 MAML2Q8IZL2 1156 aaPredicted RBP16.65■□□□□ 0.26
CCNA1-203ENST00000625767 PLAC1Q9HBJ0 212 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 SAYSD1Q9NPB0 183 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 CHRAC1Q9NRG0 131 aa16.65■□□□□ 0.26
CCNA1-203ENST00000625767 SLC2A6Q9UGQ3 507 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms