RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 NUDCD1Q96RS6 583 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 LGMNQ99538 433 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 SEMA3CQ99985 751 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 MGME1Q9BQP7 344 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 WRAP53Q9BUR4 548 aaKnown RBP7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 C1QTNF7Q9BXJ2 289 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 HDAC8Q9BY41 377 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 CEP41Q9BYV8 373 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 CPEB1Q9BZB8 566 aaKnown RBP7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 OSBPL8Q9BZF1 889 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 BRD8Q9H0E9 1235 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 SUV39H2Q9H5I1 410 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 KLHL8Q9P2G9 620 aaPredicted RBP7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 SAE1Q9UBE0 346 aaPredicted RBP7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 PILRBQ9UKJ0 227 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 SLC6A14Q9UN76 642 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 ITM2BQ9Y287 266 aa7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.29□□□□□ -1.24
NPLOC4-221ENST00000625705 NUP205Q92621 2012 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 CUL9Q8IWT3 2517 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 LOC100996750A0A140TA64 210 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 A0A1W2PQ67 120 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 MUSKO15146 869 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 SLC31A1O15431 190 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 TSPAN6O43657 245 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 KIF5CO60282 957 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 LZTS3O60299 673 aaPredicted RBP7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 SOCS5O75159 536 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 JCHAINP01591 159 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 SERPINF2P08697 491 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 PECAM1P16284 738 aaPredicted RBP7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 NUDT1P36639 197 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 RGRP47804 291 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 CSNK1DP48730 415 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 SUOXP51687 545 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 AFF3P51826 1226 aaKnown RBP7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 GDF10P55107 478 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 EIF3EP60228 445 aaKnown RBP7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 PPP2CBP62714 309 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 RPS21P63220 83 aaKnown RBP7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 PPP2CAP67775 309 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 DSC2Q02487 901 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 NSUN2Q08J23 767 aaKnown RBP eCLIP7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 SLC10A2Q12908 348 aaPredicted RBP7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 STAT4Q14765 748 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 UAP1L1Q3KQV9 507 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 RALGPS1Q5JS13 557 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 ARMC12Q5T9G4 340 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 NAPEPLDQ6IQ20 393 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 KIAA1161Q6NSJ0 714 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 CCDC70Q6NSX1 233 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 NEK5Q6P3R8 708 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 DARS2Q6PI48 645 aaKnown RBP7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 BBS12Q6ZW61 710 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 USP45Q70EL2 814 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 B4GALNT4Q76KP1 1039 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 ZSCAN30Q86W11 494 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 TRIM69Q86WT6 500 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 HORMAD1Q86X24 394 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 PLPP7Q8NBV4 271 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 ALG3Q92685 438 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 LRRC45Q96CN5 670 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 SLC6A18Q96N87 628 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 TSGA13Q96PP4 275 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 KRTAP4-6Q9BYQ5 205 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 NOD2Q9HC29 1040 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 TM9SF3Q9HD45 589 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 PARD6AQ9NPB6 346 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 FSCN3Q9NQT6 498 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 TMEM74BQ9NUR3 256 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 TRMT1Q9NXH9 659 aaKnown RBP7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 DKK3Q9UBP4 350 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 AMACRQ9UHK6 382 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 DMTF1Q9Y222 760 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 ATP8A1Q9Y2Q0 1164 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 PCDHGC4Q9Y5F7 938 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 TNRC6BQ9UPQ9 1833 aaKnown RBP7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 ANKRD36A6QL64 1941 aa7.28□□□□□ -1.24
NPLOC4-221ENST00000625705 A0A0C4DFX4 3053 aa7.27□□□□□ -1.25
NPLOC4-221ENST00000625705 SPAG17Q6Q759 2223 aa7.27□□□□□ -1.25
NPLOC4-221ENST00000625705 A0A1W2PPC4 97 aa7.27□□□□□ -1.25
NPLOC4-221ENST00000625705 LNP1A1A4G5 178 aa7.27□□□□□ -1.25
NPLOC4-221ENST00000625705 GOLGA6CA6NDK9 693 aa7.27□□□□□ -1.25
NPLOC4-221ENST00000625705 GOLGA6BA6NDN3 693 aa7.27□□□□□ -1.25
NPLOC4-221ENST00000625705 A8MX80 341 aa7.27□□□□□ -1.25
NPLOC4-221ENST00000625705 HACD1B0YJ81 288 aa7.27□□□□□ -1.25
NPLOC4-221ENST00000625705 F5H423 210 aaPredicted RBP7.27□□□□□ -1.25
NPLOC4-221ENST00000625705 PRAMEF26H0Y7S4 382 aa7.27□□□□□ -1.25
NPLOC4-221ENST00000625705 APOC4-APOC2K7ER74 178 aa7.27□□□□□ -1.25
NPLOC4-221ENST00000625705 RNF103O00237 685 aa7.27□□□□□ -1.25
NPLOC4-221ENST00000625705 KCNK3O14649 394 aa7.27□□□□□ -1.25
NPLOC4-221ENST00000625705 AP1G1O43747 822 aa7.27□□□□□ -1.25
NPLOC4-221ENST00000625705 MAGEC1O60732 1142 aa7.27□□□□□ -1.25
NPLOC4-221ENST00000625705 GJB3O75712 270 aa7.27□□□□□ -1.25
NPLOC4-221ENST00000625705 ZNF189O75820 626 aaPredicted RBP7.27□□□□□ -1.25
NPLOC4-221ENST00000625705 TM7SF2O76062 418 aa7.27□□□□□ -1.25
NPLOC4-221ENST00000625705 CER1O95813 267 aa7.27□□□□□ -1.25
NPLOC4-221ENST00000625705 IGHA1P01876 353 aa7.27□□□□□ -1.25
NPLOC4-221ENST00000625705 APOC2P02655 101 aa7.27□□□□□ -1.25
NPLOC4-221ENST00000625705 SLC4A1P02730 911 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms