RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 TSGA13Q96PP4 275 aa20.15■□□□□ 0.82
R3HCC1-210ENST00000625275 HDAC8Q9BY41 377 aa20.15■□□□□ 0.82
R3HCC1-210ENST00000625275 FREM2Q5SZK8 3169 aa20.15■□□□□ 0.82
R3HCC1-210ENST00000625275 CXorf51AA0A1B0GTR3 108 aa20.14■□□□□ 0.81
R3HCC1-210ENST00000625275 LEFTY1O75610 366 aa20.14■□□□□ 0.81
R3HCC1-210ENST00000625275 PEX11BO96011 259 aa20.14■□□□□ 0.81
R3HCC1-210ENST00000625275 EIF3EP60228 445 aaKnown RBP20.14■□□□□ 0.81
R3HCC1-210ENST00000625275 PRKD1Q15139 912 aaPredicted RBP20.14■□□□□ 0.81
R3HCC1-210ENST00000625275 HORMAD1Q86X24 394 aa20.14■□□□□ 0.81
R3HCC1-210ENST00000625275 TMEM145Q8NBT3 493 aa20.14■□□□□ 0.81
R3HCC1-210ENST00000625275 CNDP2Q96KP4 475 aaKnown RBP20.14■□□□□ 0.81
R3HCC1-210ENST00000625275 MYOCQ99972 504 aa20.14■□□□□ 0.81
R3HCC1-210ENST00000625275 CA5BQ9Y2D0 317 aa20.14■□□□□ 0.81
R3HCC1-210ENST00000625275 FCF1Q9Y324 198 aaKnown RBP20.14■□□□□ 0.81
R3HCC1-210ENST00000625275 CACNA1GO43497 2377 aa20.14■□□□□ 0.81
R3HCC1-210ENST00000625275 SLC31A1O15431 190 aa20.13■□□□□ 0.81
R3HCC1-210ENST00000625275 CCNCP24863 283 aa20.13■□□□□ 0.81
R3HCC1-210ENST00000625275 ITGB7P26010 798 aa20.13■□□□□ 0.81
R3HCC1-210ENST00000625275 CCNHP51946 323 aaPredicted RBP20.13■□□□□ 0.81
R3HCC1-210ENST00000625275 NEK3P51956 506 aa20.13■□□□□ 0.81
R3HCC1-210ENST00000625275 GEMIN4P57678 1058 aaKnown RBP20.13■□□□□ 0.81
R3HCC1-210ENST00000625275 AP1B1Q10567 949 aa20.13■□□□□ 0.81
R3HCC1-210ENST00000625275 XRCC4Q13426 336 aa20.13■□□□□ 0.81
R3HCC1-210ENST00000625275 ZNF284Q2VY69 593 aa20.13■□□□□ 0.81
R3HCC1-210ENST00000625275 EID2Q8N6I1 236 aa20.13■□□□□ 0.81
R3HCC1-210ENST00000625275 SLC35B2Q8TB61 432 aa20.13■□□□□ 0.81
R3HCC1-210ENST00000625275 TFB1MQ8WVM0 346 aaKnown RBP20.13■□□□□ 0.81
R3HCC1-210ENST00000625275 MAIP1Q8WWC4 291 aa20.13■□□□□ 0.81
R3HCC1-210ENST00000625275 C1orf54Q8WWF1 131 aa20.13■□□□□ 0.81
R3HCC1-210ENST00000625275 KLK6Q92876 244 aa20.13■□□□□ 0.81
R3HCC1-210ENST00000625275 KLHDC7BQ96G42 594 aa20.13■□□□□ 0.81
R3HCC1-210ENST00000625275 QKIQ96PU8 341 aaKnown RBP eCLIP20.13■□□□□ 0.81
R3HCC1-210ENST00000625275 NAP1L3Q99457 506 aaPredicted RBP20.13■□□□□ 0.81
R3HCC1-210ENST00000625275 HEPHQ9BQS7 1158 aa20.13■□□□□ 0.81
R3HCC1-210ENST00000625275 BRD8Q9H0E9 1235 aa20.13■□□□□ 0.81
R3HCC1-210ENST00000625275 CCDC86Q9H6F5 360 aaKnown RBP20.13■□□□□ 0.81
R3HCC1-210ENST00000625275 UBA2Q9UBT2 640 aaPredicted RBP20.13■□□□□ 0.81
R3HCC1-210ENST00000625275 PCDHGA1Q9Y5H4 931 aa20.13■□□□□ 0.81
R3HCC1-210ENST00000625275 TAF4O00268 1085 aa20.12■□□□□ 0.81
R3HCC1-210ENST00000625275 PCDH8O95206 1070 aa20.12■□□□□ 0.81
R3HCC1-210ENST00000625275 LDOC1O95751 146 aaPredicted RBP20.12■□□□□ 0.81
R3HCC1-210ENST00000625275 RBP3P10745 1247 aa20.12■□□□□ 0.81
R3HCC1-210ENST00000625275 BNIP3Q12983 259 aa20.12■□□□□ 0.81
R3HCC1-210ENST00000625275 SMAD1Q15797 465 aaKnown RBP20.12■□□□□ 0.81
R3HCC1-210ENST00000625275 CARD16Q5EG05 197 aa20.12■□□□□ 0.81
R3HCC1-210ENST00000625275 TIGD7Q6NT04 549 aaPredicted RBP20.12■□□□□ 0.81
R3HCC1-210ENST00000625275 DHRS13Q6UX07 377 aa20.12■□□□□ 0.81
R3HCC1-210ENST00000625275 KANSL1Q7Z3B3 1105 aa20.12■□□□□ 0.81
R3HCC1-210ENST00000625275 CCDC13Q8IYE1 715 aa20.12■□□□□ 0.81
R3HCC1-210ENST00000625275 KIF18AQ8NI77 898 aa20.12■□□□□ 0.81
R3HCC1-210ENST00000625275 FATE1Q969F0 183 aa20.12■□□□□ 0.81
R3HCC1-210ENST00000625275 ISG20Q96AZ6 181 aaKnown RBP20.12■□□□□ 0.81
R3HCC1-210ENST00000625275 ZNF599Q96NL3 588 aa20.12■□□□□ 0.81
R3HCC1-210ENST00000625275 AP1M1Q9BXS5 423 aa20.12■□□□□ 0.81
R3HCC1-210ENST00000625275 TM6SF2Q9BZW4 377 aa20.12■□□□□ 0.81
R3HCC1-210ENST00000625275 C10orf88Q9H8K7 445 aa20.12■□□□□ 0.81
R3HCC1-210ENST00000625275 DNPEPQ9ULA0 475 aa20.12■□□□□ 0.81
R3HCC1-210ENST00000625275 HACD1B0YJ81 288 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 H7C0C1 242 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 KCNK1O00180 336 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 PDE2AO00408 941 aaPredicted RBP20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 MATN3O15232 486 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 LIASO43766 372 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 TMCC1O94876 653 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 HNRNPA2B1P22626 353 aaKnown RBP20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 AKT2P31751 481 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 ATP5OP48047 213 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 SLC10A7Q0GE19 358 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 INO80DQ53TQ3 878 aaPredicted RBP20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 TMCO4Q5TGY1 634 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 PRELID2Q8N945 189 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 MAML1Q92585 1016 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 FRMD8P1Q9BZ68 369 aaPredicted RBP20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 ZDHHC6Q9H6R6 413 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 FZD3Q9NPG1 666 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 ZFR2Q9UPR6 939 aaKnown RBP20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 RFPL3O75679 317 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 URI1O94763 535 aaPredicted RBP20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 THEGLP0DJG4 465 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 ADRB3P13945 408 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 DNAJC3Q13217 504 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 CCNG2Q16589 344 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 TMEM259Q4ZIN3 620 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 SEL1L3Q68CR1 1132 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 MARCH9Q86YJ5 346 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 PLPP6Q8IY26 295 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 CASKIN2Q8WXE0 1202 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 RNF14Q9UBS8 474 aa20.11■□□□□ 0.81
R3HCC1-210ENST00000625275 ZFHX4Q86UP3 3567 aa20.1■□□□□ 0.81
R3HCC1-210ENST00000625275 FAM149AA5PLN7 773 aa20.1■□□□□ 0.81
R3HCC1-210ENST00000625275 KRIT1O00522 736 aa20.1■□□□□ 0.81
R3HCC1-210ENST00000625275 CCNB1P14635 433 aa20.1■□□□□ 0.81
R3HCC1-210ENST00000625275 RBL1P28749 1068 aa20.1■□□□□ 0.81
R3HCC1-210ENST00000625275 ACADVLP49748 655 aa20.1■□□□□ 0.81
R3HCC1-210ENST00000625275 SNX1Q13596 522 aa20.1■□□□□ 0.81
R3HCC1-210ENST00000625275 RFTN1Q14699 578 aaPredicted RBP20.1■□□□□ 0.81
R3HCC1-210ENST00000625275 LBRQ14739 615 aaKnown RBP20.1■□□□□ 0.81
R3HCC1-210ENST00000625275 CYTH1Q15438 398 aa20.1■□□□□ 0.81
R3HCC1-210ENST00000625275 OASLQ15646 514 aaKnown RBP20.1■□□□□ 0.81
R3HCC1-210ENST00000625275 FAM182AQ5T1J6 154 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms