RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 PPP1R36Q96LQ0 422 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 TMEM237Q96Q45 408 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 OMDQ99983 421 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 MGME1Q9BQP7 344 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 FEM1AQ9BSK4 669 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 YIPF2Q9BWQ6 316 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 C20orf27Q9GZN8 174 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 MRM3Q9HC36 420 aaKnown RBP9.98□□□□□ -0.81
VTA1-205ENST00000620996 MAN1C1Q9NR34 630 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 MARCH4Q9P2E8 410 aaPredicted RBP9.98□□□□□ -0.81
VTA1-205ENST00000620996 VPS51Q9UID3 782 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 HAO1Q9UJM8 370 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 LEFTY2O00292 366 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 CBX6O95503 412 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 C5orf22Q49AR2 442 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 ALYREFQ86V81 257 aaKnown RBP9.98□□□□□ -0.81
VTA1-205ENST00000620996 C2CD4AQ8NCU7 369 aaPredicted RBP9.98□□□□□ -0.81
VTA1-205ENST00000620996 TTC8Q8TAM2 541 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 SH3RF2Q8TEC5 729 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 ING5Q8WYH8 240 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 NXNL1Q96CM4 212 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 RPL10LQ96L21 214 aaKnown RBP9.98□□□□□ -0.81
VTA1-205ENST00000620996 ACE2Q9BYF1 805 aaPredicted RBP9.98□□□□□ -0.81
VTA1-205ENST00000620996 TNKS2Q9H2K2 1166 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 THAP1Q9NVV9 213 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 CCL26Q9Y258 94 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 SPO11Q9Y5K1 396 aa9.98□□□□□ -0.81
VTA1-205ENST00000620996 LOC285095A0A1B0GVY8 99 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 CCDC162PA2VCL2 907 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 A8MX80 341 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 LILRB3O75022 631 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 FSBPO95073 299 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 CYBBP04839 570 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 SERPINE1P05121 402 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 FGF3P11487 239 aaPredicted RBP9.97□□□□□ -0.81
VTA1-205ENST00000620996 GKP32189 559 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 NTHL1P78549 312 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 RCN2Q14257 317 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 FRG1Q14331 258 aaKnown RBP9.97□□□□□ -0.81
VTA1-205ENST00000620996 TEAD2Q15562 447 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 LACTB2Q53H82 288 aaPredicted RBP9.97□□□□□ -0.81
VTA1-205ENST00000620996 MBLAC2Q68D91 279 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 PSRC1Q6PGN9 363 aaPredicted RBP9.97□□□□□ -0.81
VTA1-205ENST00000620996 MFSD6LQ8IWD5 586 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 PARP9Q8IXQ6 854 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 KLHDC8BQ8IXV7 354 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 CMTM8Q8IZV2 173 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 OR4K2Q8NGD2 314 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 ADAMTS19Q8TE59 1207 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 FATE1Q969F0 183 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 SLC46A2Q9BY10 475 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 FAM96AQ9H5X1 160 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 ARNT2Q9HBZ2 717 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 GPAMQ9HCL2 828 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 TLR9Q9NR96 1032 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 ARMCX1Q9P291 453 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 XPR1Q9UBH6 696 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 TBC1D30Q9Y2I9 924 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 PCDHB9Q9Y5E1 797 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 GRXCR1A8MXD5 290 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 LDB2O43679 373 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 CRTAMO95727 393 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 SLC35E2BP0CK96 405 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 DNAJB1P25685 340 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 IRS1P35568 1242 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 BMPR1AP36894 532 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 ALDH18A1P54886 795 aaKnown RBP9.97□□□□□ -0.81
VTA1-205ENST00000620996 C1QTNF8P60827 252 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 INSCQ1MX18 579 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 WDR75Q8IWA0 830 aaKnown RBP9.97□□□□□ -0.81
VTA1-205ENST00000620996 ST13P5Q8NFI4 369 aaPredicted RBP9.97□□□□□ -0.81
VTA1-205ENST00000620996 LBHD1Q9BQE6 289 aaPredicted RBP9.97□□□□□ -0.81
VTA1-205ENST00000620996 CYP4F12Q9HCS2 524 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 PNPOQ9NVS9 261 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 CLEC4EQ9ULY5 219 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 BPTFQ12830 3046 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 CD3EAPO15446 510 aaKnown RBP9.97□□□□□ -0.81
VTA1-205ENST00000620996 EPCAMP16422 314 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 WEE1P30291 646 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 HADHAP40939 763 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 CCR2P41597 374 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 MAGEA10P43363 369 aaPredicted RBP9.97□□□□□ -0.81
VTA1-205ENST00000620996 NCALDP61601 193 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 HTRA4P83105 476 aaPredicted RBP9.97□□□□□ -0.81
VTA1-205ENST00000620996 PDCD2Q16342 344 aaPredicted RBP9.97□□□□□ -0.81
VTA1-205ENST00000620996 MRNIPQ6NTE8 343 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 PIM3Q86V86 326 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 TMC8Q8IU68 726 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 BRSK1Q8TDC3 778 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 NSMCE3Q96MG7 304 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 C2orf49Q9BVC5 232 aaPredicted RBP9.97□□□□□ -0.81
VTA1-205ENST00000620996 ADGRE3Q9BY15 652 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 CATSPERZQ9NTU4 200 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 TXLNGQ9NUQ3 528 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 TSR3Q9UJK0 312 aaKnown RBP9.97□□□□□ -0.81
VTA1-205ENST00000620996 SLC12A4Q9UP95 1085 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 FIS1Q9Y3D6 152 aa9.97□□□□□ -0.81
VTA1-205ENST00000620996 MIA3Q5JRA6 1907 aa9.96□□□□□ -0.81
VTA1-205ENST00000620996 C2orf81A6NN90 581 aa9.96□□□□□ -0.81
VTA1-205ENST00000620996 NEDD8-MDP1E9PL57 170 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms