RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 INTS7Q9NVH2 962 aaKnown RBP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 ABI2Q9NYB9 513 aaPredicted RBP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 OPTCQ9UBM4 332 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 LRRC7Q96NW7 1537 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 NOTOA8MTQ0 251 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 TULP3O75386 442 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 CST1P01037 141 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 ATP5F1P24539 256 aaPredicted RBP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 MAGEA12P43365 314 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 PGDP52209 483 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 DRG2P55039 364 aaKnown RBP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 CYP20A1Q6UW02 462 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 ARHGAP36Q6ZRI8 547 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 ADGRF4Q8IZF3 695 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 STAG3L4Q8TBR4 150 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 TMEM159Q96B96 161 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 S100PBPQ96BU1 408 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 SLC39A3Q9BRY0 314 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 CCDC167Q9P0B6 97 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 DNPEPQ9ULA0 475 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 GNEQ9Y223 722 aaKnown RBP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 NEDD4P46934 1319 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 A0A096LPK6 155 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 HLA-DQA2P01906 255 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 DGKAP23743 735 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 TAF6P49848 677 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 PHC1P78364 1004 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 PLEKHG4Q58EX7 1191 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 HPDLQ96IR7 371 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 GTPBP2Q9BX10 602 aaKnown RBP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 IL22Q9GZX6 179 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 KIAA1683Q9H0B3 1180 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 EVLQ9UI08 416 aaPredicted RBP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 RRN3P2A6NIE6 340 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 NUAK1O60285 661 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 RRM1P23921 792 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 RPA1P27694 616 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 RORAP35398 523 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 NOTUMQ6P988 496 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 SYT12Q8IV01 421 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 DAW1Q8N136 415 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 ZNF615Q8N8J6 731 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 THAP2Q9H0W7 228 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 CLPXO76031 633 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 OR5F1O95221 314 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 COX7A2P14406 83 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 ACSM2AQ08AH3 577 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 BTG3Q14201 252 aaPredicted RBP7.19□□□□□ -1.26
COLCA1-205ENST00000620864 UBXN2BQ14CS0 331 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 MAPKAPK3Q16644 382 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 ACSM2BQ68CK6 577 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 MOXD1Q6UVY6 613 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 CYP2R1Q6VVX0 501 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 ZNF621Q6ZSS3 439 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 CDYL2Q8N8U2 506 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 SLC4A11Q8NBS3 891 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 DIRAS2Q96HU8 199 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 FAM126AQ9BYI3 521 aaPredicted RBP7.19□□□□□ -1.26
COLCA1-205ENST00000620864 CERS4Q9HA82 394 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 DNAJB4Q9UDY4 337 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 PCDHGB3Q9Y5G1 929 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 MAP2K7O14733 419 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 OGTO15294 1046 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 STAU1O95793 577 aaKnown RBP7.19□□□□□ -1.26
COLCA1-205ENST00000620864 HOXC6P09630 235 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 ZNF37AP17032 561 aaPredicted RBP7.19□□□□□ -1.26
COLCA1-205ENST00000620864 MEA1Q16626 185 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 PTCHD4Q6ZW05 846 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 ZZZ3Q8IYH5 903 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 TAMM41Q96BW9 452 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 NCKAP1Q9Y2A7 1128 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 SLC22A2O15244 555 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 LAMTOR5O43504 91 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 ATP6V1G1O75348 118 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 RSL1D1O76021 490 aaKnown RBP7.19□□□□□ -1.26
COLCA1-205ENST00000620864 MBL2P11226 248 aaPredicted RBP7.19□□□□□ -1.26
COLCA1-205ENST00000620864 CKBP12277 381 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 SLC6A4P31645 630 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 SGCGQ13326 291 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 TTMPQ5BVD1 217 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 CHERPQ8IWX8 916 aaKnown RBP7.19□□□□□ -1.26
COLCA1-205ENST00000620864 GMCL1Q96IK5 515 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 DNAJC1Q96KC8 554 aaKnown RBP7.19□□□□□ -1.26
COLCA1-205ENST00000620864 MRPL57Q9BQC6 102 aaKnown RBP7.19□□□□□ -1.26
COLCA1-205ENST00000620864 BHLHE41Q9C0J9 482 aaPredicted RBP7.19□□□□□ -1.26
COLCA1-205ENST00000620864 CCDC86Q9H6F5 360 aaKnown RBP7.19□□□□□ -1.26
COLCA1-205ENST00000620864 DHX33Q9H6R0 707 aaKnown RBP7.19□□□□□ -1.26
COLCA1-205ENST00000620864 CYP4F12Q9HCS2 524 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 C14orf105Q9NVL8 296 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 ZNF639Q9UID6 485 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 RBM7Q9Y580 266 aaKnown RBP7.19□□□□□ -1.26
COLCA1-205ENST00000620864 LYVE1Q9Y5Y7 322 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 PRAMEF33A0A0G2JMD5 474 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 PRAMEF10O60809 474 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 MAPTP10636 758 aaKnown RBP7.19□□□□□ -1.26
COLCA1-205ENST00000620864 GLRBP48167 497 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 CCL23P55773 120 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 MED22Q15528 200 aa7.19□□□□□ -1.26
COLCA1-205ENST00000620864 FSCN1Q16658 493 aaKnown RBP7.19□□□□□ -1.26
COLCA1-205ENST00000620864 ATF7IP2Q5U623 682 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms