RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 MGME1Q9BQP7 344 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 SLC13A1Q9BZW2 595 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 TSPY26PQ9H489 355 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 SCUBE2Q9NQ36 999 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 RCOR3Q9P2K3 495 aaPredicted RBP17.25■□□□□ 0.35
HMGN3-203ENST00000620514 B4GALT6Q9UBX8 382 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 SALL4Q9UJQ4 1053 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 LHX6Q9UPM6 363 aa17.25■□□□□ 0.35
HMGN3-203ENST00000620514 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.24■□□□□ 0.35
HMGN3-203ENST00000620514 CPED1A4D0V7 1026 aa17.24■□□□□ 0.35
HMGN3-203ENST00000620514 TPP1O14773 563 aa17.24■□□□□ 0.35
HMGN3-203ENST00000620514 CBFA2T2O43439 604 aa17.24■□□□□ 0.35
HMGN3-203ENST00000620514 HTRA2O43464 458 aaPredicted RBP17.24■□□□□ 0.35
HMGN3-203ENST00000620514 MAP3K6O95382 1288 aa17.24■□□□□ 0.35
HMGN3-203ENST00000620514 H2AFZP0C0S5 128 aa17.24■□□□□ 0.35
HMGN3-203ENST00000620514 ELFN1P0C7U0 828 aa17.24■□□□□ 0.35
HMGN3-203ENST00000620514 HSPA9P38646 679 aaKnown RBP17.24■□□□□ 0.35
HMGN3-203ENST00000620514 PEX5P50542 639 aa17.24■□□□□ 0.35
HMGN3-203ENST00000620514 DUSP3P51452 185 aaPredicted RBP17.24■□□□□ 0.35
HMGN3-203ENST00000620514 POLR2LP62875 67 aaKnown RBP17.24■□□□□ 0.35
HMGN3-203ENST00000620514 TRAF2Q12933 501 aa17.24■□□□□ 0.35
HMGN3-203ENST00000620514 CDCP2Q5VXM1 449 aa17.24■□□□□ 0.35
HMGN3-203ENST00000620514 NCBP2-AS2Q69YL0 99 aa17.24■□□□□ 0.35
HMGN3-203ENST00000620514 H2AFVQ71UI9 128 aa17.24■□□□□ 0.35
HMGN3-203ENST00000620514 HID1Q8IV36 788 aa17.24■□□□□ 0.35
HMGN3-203ENST00000620514 VSTM4Q8IW00 320 aa17.24■□□□□ 0.35
HMGN3-203ENST00000620514 CACTIN-AS1Q8N1I8 211 aa17.24■□□□□ 0.35
HMGN3-203ENST00000620514 PELI3Q8N2H9 469 aa17.24■□□□□ 0.35
HMGN3-203ENST00000620514 RNF214Q8ND24 703 aa17.24■□□□□ 0.35
HMGN3-203ENST00000620514 PCDH19Q8TAB3 1148 aa17.24■□□□□ 0.35
HMGN3-203ENST00000620514 PDCD6IPQ8WUM4 868 aaKnown RBP17.24■□□□□ 0.35
HMGN3-203ENST00000620514 CTNNBL1Q8WYA6 563 aaPredicted RBP17.24■□□□□ 0.35
HMGN3-203ENST00000620514 NRSN2Q9GZP1 204 aa17.24■□□□□ 0.35
HMGN3-203ENST00000620514 USP29Q9HBJ7 922 aa17.24■□□□□ 0.35
HMGN3-203ENST00000620514 UVRAGQ9P2Y5 699 aa17.24■□□□□ 0.35
HMGN3-203ENST00000620514 PCDHB1Q9Y5F3 818 aa17.24■□□□□ 0.35
HMGN3-203ENST00000620514 AK5Q9Y6K8 562 aa17.24■□□□□ 0.35
HMGN3-203ENST00000620514 SHROOM3Q8TF72 1996 aa17.24■□□□□ 0.35
HMGN3-203ENST00000620514 CFAP69A5D8W1 941 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 TMEM110-MUSTN1A8MSY1 372 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 LMO7DNF2Z398 122 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 YY2O15391 372 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 GP1BAP07359 652 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 ANXA6P08133 673 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 MMP13P45452 471 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 HK3P52790 923 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 MTM1Q13496 603 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 TRIM14Q14142 442 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 RTP5Q14D33 572 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 PTPRRQ15256 657 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 MARC1Q5VT66 337 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 EFL1Q7Z2Z2 1120 aaKnown RBP17.23■□□□□ 0.35
HMGN3-203ENST00000620514 RD3Q7Z3Z2 195 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 SLC35F3Q8IY50 421 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 BBS5Q8N3I7 341 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 KCTD6Q8NC69 237 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 MAPK15Q8TD08 544 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 LRRN4Q8WUT4 740 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 NSMCE1Q8WV22 266 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 HNRNPLLQ8WVV9 542 aaKnown RBP17.23■□□□□ 0.35
HMGN3-203ENST00000620514 TBATAQ96M53 351 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 CHP1Q99653 195 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 BOCQ9BWV1 1114 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 DEF6Q9H4E7 631 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 NT5MQ9NPB1 228 aa17.23■□□□□ 0.35
HMGN3-203ENST00000620514 URB1O60287 2271 aaKnown RBP17.23■□□□□ 0.35
HMGN3-203ENST00000620514 ZFYVE26Q68DK2 2539 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 DSPP15924 2871 aaKnown RBP17.22■□□□□ 0.35
HMGN3-203ENST00000620514 SSU72P8A0A1W2PR75 194 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 CASC3O15234 703 aaKnown RBP17.22■□□□□ 0.35
HMGN3-203ENST00000620514 TLX3O43711 291 aaPredicted RBP17.22■□□□□ 0.35
HMGN3-203ENST00000620514 SOCS5O75159 536 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 RASGRP1O95267 797 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 CPP00450 1065 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 HTR1BP28222 390 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 SRP54P61011 504 aaKnown RBP17.22■□□□□ 0.35
HMGN3-203ENST00000620514 GALNT2Q10471 571 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 ACOX1Q15067 660 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 PAFAH1B3Q15102 231 aaKnown RBP17.22■□□□□ 0.35
HMGN3-203ENST00000620514 NR0B2Q15466 257 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 COL28A1Q2UY09 1125 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 ANKRD20A8PQ5CZ79 823 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 PERM1Q5SV97 790 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 C6orf132Q5T0Z8 1188 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 CRTC1Q6UUV9 634 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 TEX26Q8N6G2 289 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 FUBP1Q96AE4 644 aaKnown RBP17.22■□□□□ 0.35
HMGN3-203ENST00000620514 PDXPQ96GD0 296 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 COQ10AQ96MF6 247 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 WDR92Q96MX6 357 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 ABHD10Q9NUJ1 306 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 SPTLC3Q9NUV7 552 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 EVA1BQ9NVM1 165 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 KLQ9UEF7 1012 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 ASXL3Q9C0F0 2248 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 FAM208BQ5VWN6 2430 aa17.22■□□□□ 0.35
HMGN3-203ENST00000620514 ADAMTS20P59510 1910 aa17.21■□□□□ 0.35
HMGN3-203ENST00000620514 EME2A4GXA9 379 aaPredicted RBP17.21■□□□□ 0.35
HMGN3-203ENST00000620514 TMEM202A6NGA9 273 aa17.21■□□□□ 0.35
HMGN3-203ENST00000620514 AKR1B10O60218 316 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms