RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 GOLGA8RI6L899 631 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 RASSF9O75901 435 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 IL1BP01584 269 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 PYGBP11216 843 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 HNRNPLP14866 589 aaKnown RBP eCLIP21.72■■□□□ 1.071e-8■■■□□ 18.5
SGMS1-210ENST00000619438 PGAM1P18669 254 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 PTPN3P26045 913 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 LPAL2Q16609 132 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 CHST9Q7L1S5 443 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 WFIKKN2Q8TEU8 576 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 SPOCK2Q92563 424 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 MYEOVQ96EZ4 313 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 SLC17A7Q9P2U7 560 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 USH1CQ9Y6N9 552 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 FAM186AA6NE01 2351 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 TCRBV21S2A2A0A5A6 115 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 WASH3PC4AMC7 463 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 NPC1O15118 1278 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 PAGE1O75459 146 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 RFPL1O75677 317 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 RPP40O75818 363 aaKnown RBP21.72■■□□□ 1.07
SGMS1-210ENST00000619438 PABPC1P11940 636 aaKnown RBP21.72■■□□□ 1.07
SGMS1-210ENST00000619438 BNIP1Q12981 228 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 FRG1Q14331 258 aaKnown RBP21.72■■□□□ 1.07
SGMS1-210ENST00000619438 RABGAP1LQ5R372 815 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 TRMT10BQ6PF06 316 aaKnown RBP21.72■■□□□ 1.07
SGMS1-210ENST00000619438 PID1Q7Z2X4 250 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 AHI1Q8N157 1196 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 CCDC63Q8NA47 563 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 SUMF1Q8NBK3 374 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 FIBINQ8TAL6 211 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 HMGB4Q8WW32 186 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 ERLEC1Q96DZ1 483 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 RPRD1AQ96P16 312 aaPredicted RBP21.72■■□□□ 1.07
SGMS1-210ENST00000619438 HAPLN3Q96S86 360 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 KLF6Q99612 283 aaPredicted RBP21.72■■□□□ 1.07
SGMS1-210ENST00000619438 TPSD1Q9BZJ3 242 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 SLCO1B3Q9NPD5 702 aa21.72■■□□□ 1.07
SGMS1-210ENST00000619438 LRIG2O94898 1065 aa21.71■■□□□ 1.07
SGMS1-210ENST00000619438 UBOX5O94941 541 aa21.71■■□□□ 1.07
SGMS1-210ENST00000619438 AP2A1O95782 977 aa21.71■■□□□ 1.07
SGMS1-210ENST00000619438 POLR2EP19388 210 aaKnown RBP21.71■■□□□ 1.07
SGMS1-210ENST00000619438 GARSP41250 739 aaKnown RBP21.71■■□□□ 1.07
SGMS1-210ENST00000619438 MGAT5Q09328 741 aa21.71■■□□□ 1.07
SGMS1-210ENST00000619438 USP39Q53GS9 565 aaKnown RBP21.71■■□□□ 1.07
SGMS1-210ENST00000619438 NPWQ8N729 165 aa21.71■■□□□ 1.07
SGMS1-210ENST00000619438 SORCS1Q8WY21 1168 aa21.71■■□□□ 1.07
SGMS1-210ENST00000619438 SEPT10Q9P0V9 454 aa21.71■■□□□ 1.07
SGMS1-210ENST00000619438 THAP10Q9P2Z0 257 aaPredicted RBP21.71■■□□□ 1.07
SGMS1-210ENST00000619438 VANGL2Q9ULK5 521 aa21.71■■□□□ 1.07
SGMS1-210ENST00000619438 STON1Q9Y6Q2 735 aa21.71■■□□□ 1.07
SGMS1-210ENST00000619438 EP300Q09472 2414 aaPredicted RBP21.71■■□□□ 1.07
SGMS1-210ENST00000619438 PTPRZ1P23471 2315 aaPredicted RBP21.71■■□□□ 1.07
SGMS1-210ENST00000619438 CFAP73A6NFT4 308 aa21.7■■□□□ 1.06
SGMS1-210ENST00000619438 COPEO14579 308 aa21.7■■□□□ 1.06
SGMS1-210ENST00000619438 KLF11O14901 512 aa21.7■■□□□ 1.06
SGMS1-210ENST00000619438 ATP5BP06576 529 aaKnown RBP21.7■■□□□ 1.06
SGMS1-210ENST00000619438 CHRM1P11229 460 aaPredicted RBP21.7■■□□□ 1.06
SGMS1-210ENST00000619438 CD70P32970 193 aa21.7■■□□□ 1.06
SGMS1-210ENST00000619438 SKIV2L2P42285 1042 aaKnown RBP21.7■■□□□ 1.06
SGMS1-210ENST00000619438 NIPAL4Q0D2K0 466 aa21.7■■□□□ 1.06
SGMS1-210ENST00000619438 SF3A3Q12874 501 aaKnown RBP eCLIP21.7■■□□□ 1.06
SGMS1-210ENST00000619438 STARD3Q14849 445 aa21.7■■□□□ 1.06
SGMS1-210ENST00000619438 SPDYAQ5MJ70 313 aa21.7■■□□□ 1.06
SGMS1-210ENST00000619438 TMEM215Q68D42 235 aa21.7■■□□□ 1.06
SGMS1-210ENST00000619438 FBXL22Q6P050 247 aa21.7■■□□□ 1.06
SGMS1-210ENST00000619438 OTOAQ7RTW8 1153 aa21.7■■□□□ 1.06
SGMS1-210ENST00000619438 TP53INP2Q8IXH6 220 aa21.7■■□□□ 1.06
SGMS1-210ENST00000619438 KLHDC8BQ8IXV7 354 aa21.7■■□□□ 1.06
SGMS1-210ENST00000619438 FITM2Q8N6M3 262 aa21.7■■□□□ 1.06
SGMS1-210ENST00000619438 MDGA1Q8NFP4 955 aa21.7■■□□□ 1.06
SGMS1-210ENST00000619438 WFDC5Q8TCV5 224 aa21.7■■□□□ 1.06
SGMS1-210ENST00000619438 GAB3Q8WWW8 586 aa21.7■■□□□ 1.06
SGMS1-210ENST00000619438 RMDN2Q96LZ7 410 aa21.7■■□□□ 1.06
SGMS1-210ENST00000619438 GBA3Q9H227 469 aa21.7■■□□□ 1.06
SGMS1-210ENST00000619438 MANSC1Q9H8J5 431 aa21.7■■□□□ 1.06
SGMS1-210ENST00000619438 SLC40A1Q9NP59 571 aa21.7■■□□□ 1.06
SGMS1-210ENST00000619438 KLHL8Q9P2G9 620 aaPredicted RBP21.7■■□□□ 1.06
SGMS1-210ENST00000619438 NCDNQ9UBB6 729 aa21.7■■□□□ 1.06
SGMS1-210ENST00000619438 HS3ST4Q9Y661 456 aa21.7■■□□□ 1.06
SGMS1-210ENST00000619438 DMXL1Q9Y485 3027 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 LUC7L3O95232 432 aaKnown RBP21.69■■□□□ 1.06
SGMS1-210ENST00000619438 EPHB2P29323 1055 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 ZNF234Q14588 700 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 FBXW10Q5XX13 1052 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 MBLAC2Q68D91 279 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 KCTD11Q693B1 232 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 ITPRIPL1Q6GPH6 555 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 CDKL2Q92772 493 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 TSGA13Q96PP4 275 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 SRPK1Q96SB4 655 aaKnown RBP21.69■■□□□ 1.06
SGMS1-210ENST00000619438 GABRG3Q99928 467 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 KIAA1522Q9P206 1035 aaPredicted RBP21.69■■□□□ 1.06
SGMS1-210ENST00000619438 INVSQ9Y283 1065 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 PLLPQ9Y342 182 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 MYO18AQ92614 2054 aaKnown RBP21.69■■□□□ 1.06
SGMS1-210ENST00000619438 HMX2A2RU54 273 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 KCNK1O00180 336 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 SYNCRIPO60506 623 aaKnown RBP21.69■■□□□ 1.06
SGMS1-210ENST00000619438 MGAT1P26572 445 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms