RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 CSNK1DP48730 415 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 CARSP49589 748 aaKnown RBP5.3□□□□□ -1.56
SHMT1-211ENST00000618902 CCNHP51946 323 aaPredicted RBP5.3□□□□□ -1.56
SHMT1-211ENST00000618902 RWDD2BP57060 319 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 RACK1P63244 317 aaKnown RBP5.3□□□□□ -1.56
SHMT1-211ENST00000618902 IL10RBQ08334 325 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 NSUN2Q08J23 767 aaKnown RBP eCLIP5.3□□□□□ -1.56
SHMT1-211ENST00000618902 NIPAL4Q0D2K0 466 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 SPEM2Q0P670 501 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 CNTN1Q12860 1018 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 ZBTB17Q13105 803 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 KLF1Q13351 362 aaPredicted RBP5.3□□□□□ -1.56
SHMT1-211ENST00000618902 HLTFQ14527 1009 aaKnown RBP eCLIP5.3□□□□□ -1.56
SHMT1-211ENST00000618902 PRKD1Q15139 912 aaPredicted RBP5.3□□□□□ -1.56
SHMT1-211ENST00000618902 PTPRRQ15256 657 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 CST6Q15828 149 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 ACCSLQ4AC99 568 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 ODF2Q5BJF6 829 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 CARD16Q5EG05 197 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 ARSIQ5FYB1 569 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 ZFYVE27Q5T4F4 411 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 KIAA1324Q6UXG2 1013 aaKnown RBP5.3□□□□□ -1.56
SHMT1-211ENST00000618902 ZSWIM9Q86XI8 627 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 ZNF354CQ86Y25 554 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 MAP7D3Q8IWC1 876 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 C10orf67Q8IYJ2 551 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 HDDC3Q8N4P3 179 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 ATPAF2Q8N5M1 289 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 TEX26Q8N6G2 289 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 CNTD1Q8N815 330 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 GBP7Q8N8V2 638 aaPredicted RBP5.3□□□□□ -1.56
SHMT1-211ENST00000618902 CCHCR1Q8TD31 782 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 MAML1Q92585 1016 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 SLCO2A1Q92959 643 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 FATE1Q969F0 183 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 TOE1Q96GM8 510 aaKnown RBP5.3□□□□□ -1.56
SHMT1-211ENST00000618902 ZNF599Q96NL3 588 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 TSGA13Q96PP4 275 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 SMIM14Q96QK8 99 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 OMDQ99983 421 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 ERP44Q9BS26 406 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 HDAC8Q9BY41 377 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 CEP41Q9BYV8 373 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 PABPC3Q9H361 631 aaKnown RBP5.3□□□□□ -1.56
SHMT1-211ENST00000618902 YY1AP1Q9H869 796 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 ERVMER34-1Q9H9K5 563 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 CAPN10Q9HC96 672 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 DYRK4Q9NR20 520 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 SMARCAL1Q9NZC9 954 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 UBA2Q9UBT2 640 aaPredicted RBP5.3□□□□□ -1.56
SHMT1-211ENST00000618902 AMACRQ9UHK6 382 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 CYP8B1Q9UNU6 501 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.3□□□□□ -1.56
SHMT1-211ENST00000618902 HEY1Q9Y5J3 304 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 SLCO1B1Q9Y6L6 691 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 FAM169AQ9Y6X4 670 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 TRPM6Q9BX84 2022 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 CELSR3Q9NYQ7 3312 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 A0A1W2PP55 124 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 A0A1W2PPC4 97 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 LNP1A1A4G5 178 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 CFAP69A5D8W1 941 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 C5orf60A6NFR6 353 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 VILLO15195 856 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 MATN3O15232 486 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 BCAT2O15382 392 aaPredicted RBP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 RAD51CO43502 376 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 LATO43561 262 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 PCDHGA12O60330 932 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 OPHN1O60890 802 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 LEFTY1O75610 366 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 PIGNO95427 931 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 POP4O95707 220 aaKnown RBP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 AGTP01019 485 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 HLA-DQB2P05538 268 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 MMP2P08253 660 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 C1SP09871 688 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 MYBL2P10244 700 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 CXCR5P32302 372 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 SLC8A1P32418 973 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 ACSL1P33121 698 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 CD68P34810 354 aaPredicted RBP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 SERPINB6P35237 376 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 ABL2P42684 1182 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 CCT5P48643 541 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 FNTAP49354 379 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 DHPSP49366 369 aaPredicted RBP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 RENBPP51606 427 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 GYS2P54840 703 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 TAS2R38P59533 333 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 COPS2P61201 443 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 MAXP61244 160 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 SNRPD1P62314 119 aaKnown RBP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 POLR2LP62875 67 aaKnown RBP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 PPP2R2AP63151 447 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 IFI35P80217 286 aaPredicted RBP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 SHC2P98077 582 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 SLC7A5Q01650 507 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 OTUD4Q01804 1114 aaKnown RBP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 DSC2Q02487 901 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms