RNA–Protein interactions for RNA: ENST00000618865.4

SEMA3B-213, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SEMA3B, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-213ENST00000618865 DNAJB1P25685 340 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 C10orf120Q5SQS8 335 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 FAM171A1Q5VUB5 890 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 NADSYN1Q6IA69 706 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 ADGRG6Q86SQ4 1221 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 KBTBD6Q86V97 674 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 LRRC49Q8IUZ0 686 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 SNX31Q8N9S9 440 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 FUBP3Q96I24 572 aaKnown RBP eCLIP16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 PPP1R2P1Q96PQ5 205 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 NPAS2Q99743 824 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 SLC12A8A0AV02 714 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 MROH6A6NGR9 719 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 CFLARO15519 480 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 NPHS1O60500 1241 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 ATXN3P54252 364 aaPredicted RBP16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 PFKPQ01813 784 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 NFE2Q16621 373 aaPredicted RBP16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 OR52E8Q6IFG1 317 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 TEX26Q8N6G2 289 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 KYQ8NBH2 561 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 CCSER2Q9H7U1 834 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 ZBTB26Q9HCK0 441 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 UBAP1Q9NZ09 502 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 NCKIPSDQ9NZQ3 722 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 MARCH2Q9P0N8 246 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 CRYL1Q9Y2S2 319 aa16.9■□□□□ 0.3
SEMA3B-213ENST00000618865 LDB2O43679 373 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 EOMESO95936 686 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 SLC2A3P11169 496 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 ENO3P13929 434 aaPredicted RBP16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 XRCC1P18887 633 aaPredicted RBP16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 YWHAQP27348 245 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 CST5P28325 142 aaPredicted RBP16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 PBX3P40426 434 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 C1QTNF8P60827 252 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 PPP1R3AQ16821 1122 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 KIAA0408Q6ZU52 694 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 CFAP52Q8N1V2 620 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 RP9Q8TA86 221 aaKnown RBP16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 HMGCLL1Q8TB92 370 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 GDPD5Q8WTR4 605 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 PDCD6IPQ8WUM4 868 aaKnown RBP16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 RPRD1AQ96P16 312 aaPredicted RBP16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 RANBP9Q96S59 729 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 CCDC28BQ9BUN5 200 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 PPP1R12CQ9BZL4 782 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 ARL5AQ9Y689 179 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 TMEM189-UBE2V1I3L0A0 370 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 RTN3O95197 1032 aaPredicted RBP16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 S1PR4O95977 384 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 SREBF2Q12772 1141 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 CEACAM7Q14002 265 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 LBRQ14739 615 aaKnown RBP16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 POLD3Q15054 466 aaPredicted RBP16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 GPR158Q5T848 1215 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 GK5Q6ZS86 529 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 PDSS2Q86YH6 399 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 TADA1Q96BN2 335 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 MAELQ96JY0 434 aaKnown RBP16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 BTN2A3PQ96KV6 586 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 TBATAQ96M53 351 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 SEMA3CQ99985 751 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 VPS45Q9NRW7 570 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 IL37Q9NZH6 218 aa16.89■□□□□ 0.29
SEMA3B-213ENST00000618865 LTA4HP09960 611 aaKnown RBP16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 HK2P52789 917 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 AQP4P55087 323 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 DNAJB13P59910 316 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 FAM189BP81408 668 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 MS4A2Q01362 244 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 GALNT3Q14435 633 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 SEMA3AQ14563 771 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 TRIP4Q15650 581 aaPredicted RBP16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 ZNF423Q2M1K9 1284 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 FAM83EQ2M2I3 478 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 RNF220Q5VTB9 566 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 PIWIL4Q7Z3Z4 852 aaKnown RBP16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 ATP6V0D2Q8N8Y2 350 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 JADE3Q92613 823 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 UBXN10Q96LJ8 280 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 SEPT5Q99719 369 aaPredicted RBP16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 VWA7Q9Y334 891 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 TCAF2A6NFQ2 919 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 SLCO1B7G3V0H7 640 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 UBFD1O14562 309 aaKnown RBP16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 RNASEH1O60930 286 aaKnown RBP16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 SLC4A1P02730 911 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 ZCCHC18P0CG32 403 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 PRSS56P0CW18 603 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 CLCN5P51795 746 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 RNF19BQ6ZMZ0 732 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 PCSK9Q8NBP7 692 aaKnown RBP16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 FAM193BQ96PV7 902 aaPredicted RBP16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 ALG9Q9H6U8 611 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 FNIP2Q9P278 1114 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 STK39Q9UEW8 545 aa16.88■□□□□ 0.29
SEMA3B-213ENST00000618865 RAMP2O60895 175 aa16.87■□□□□ 0.29
SEMA3B-213ENST00000618865 IPO13O94829 963 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms