RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 WSCD2Q2TBF2 565 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 DEFB109BQ30KR1 87 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 SYPL2Q5VXT5 272 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 ERICH6BQ5W0A0 696 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 CRTC1Q6UUV9 634 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 DPPA4Q7L190 304 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 CBARPQ8N350 705 aaPredicted RBP4.6□□□□□ -1.67
SNCA-213ENST00000618500 Q8NA96 180 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 UBA3Q8TBC4 463 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 SH3KBP1Q96B97 665 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 ECHDC3Q96DC8 303 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 TCTN2Q96GX1 697 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 GDAP1L1Q96MZ0 367 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 USP28Q96RU2 1077 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 TREX2Q9BQ50 279 aaPredicted RBP4.6□□□□□ -1.67
SNCA-213ENST00000618500 FOXP3Q9BZS1 431 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 BRD8Q9H0E9 1235 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 MBNL1Q9NR56 388 aaKnown RBP4.6□□□□□ -1.67
SNCA-213ENST00000618500 GULP1Q9UBP9 304 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 NEU3Q9UQ49 428 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 SLC17A4Q9Y2C5 497 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 KDELR3O43731 214 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 PAGE1O75459 146 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 STK17BO94768 372 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 TRIM49P0CI25 452 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 TRIM49CP0CI26 452 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 CDH5P33151 784 aaPredicted RBP4.6□□□□□ -1.67
SNCA-213ENST00000618500 GABRB2P47870 512 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 SOX8P57073 446 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 GNA12Q03113 381 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 POLD3Q15054 466 aaPredicted RBP4.6□□□□□ -1.67
SNCA-213ENST00000618500 INPP5JQ15735 1006 aaPredicted RBP4.6□□□□□ -1.67
SNCA-213ENST00000618500 CEP135Q66GS9 1140 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 FCRL6Q6DN72 434 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 OLFML1Q6UWY5 402 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 C6orf15Q6UXA7 325 aaPredicted RBP4.6□□□□□ -1.67
SNCA-213ENST00000618500 LRRC31Q6UY01 552 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 ZNF765Q7L2R6 523 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 NLRP14Q86W24 1093 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 ZDHHC1Q8WTX9 485 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 OR1E3Q8WZA6 343 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 RELTQ969Z4 430 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 CCDC47Q96A33 483 aaKnown RBP4.6□□□□□ -1.67
SNCA-213ENST00000618500 DHX58Q96C10 678 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 C5orf34Q96MH7 638 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 LRFN5Q96NI6 719 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 MYOCQ99972 504 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 SARS2Q9NP81 518 aaKnown RBP4.6□□□□□ -1.67
SNCA-213ENST00000618500 PPP4R2Q9NY27 417 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 PRSS38A1L453 326 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 RHPN2P1A8MT19 583 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 CREG1O75629 220 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 IGSF6O95976 241 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 MT-CO1P00395 513 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 RHOQP17081 205 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 AGAP20933 346 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 PPP1R2P41236 205 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 GARSP41250 739 aaKnown RBP4.59□□□□□ -1.67
SNCA-213ENST00000618500 MARSP56192 900 aaKnown RBP4.59□□□□□ -1.67
SNCA-213ENST00000618500 RALGDSQ12967 914 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 PDCLQ13371 301 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 HIST2H2BCQ6DN03 193 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 JMJD6Q6NYC1 403 aaPredicted RBP4.59□□□□□ -1.67
SNCA-213ENST00000618500 C11orf57Q6ZUT1 292 aaPredicted RBP4.59□□□□□ -1.67
SNCA-213ENST00000618500 CIR1Q86X95 450 aaPredicted RBP4.59□□□□□ -1.67
SNCA-213ENST00000618500 CEP57L1Q8IYX8 460 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 OR8K5Q8NH50 307 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 LMO3Q8TAP4 145 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 ADAMTS17Q8TE56 1095 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 PMEPA1Q969W9 287 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 FUBP1Q96AE4 644 aaKnown RBP4.59□□□□□ -1.67
SNCA-213ENST00000618500 C14orf79Q96F83 325 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 PAGE5Q96GU1 130 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 LURAP1Q96LR2 239 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 ZYG11BQ9C0D3 744 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 UPF2Q9HAU5 1272 aaKnown RBP4.59□□□□□ -1.67
SNCA-213ENST00000618500 ERRFI1Q9UJM3 462 aaPredicted RBP4.59□□□□□ -1.67
SNCA-213ENST00000618500 HPSEQ9Y251 543 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 PCDHB3Q9Y5E6 796 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 MGAQ8IWI9 3026 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 UNC79Q9P2D8 2635 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 SNAP91O60641 907 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 RRM1P23921 792 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 IRAK1P51617 712 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 GSCP56915 257 aaPredicted RBP4.59□□□□□ -1.67
SNCA-213ENST00000618500 RAD51Q06609 339 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 DPTQ07507 201 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 C1orf61Q13536 156 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 ZNF394Q53GI3 561 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 ANKS6Q68DC2 871 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 ERAP2Q6P179 960 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 ENPP7Q6UWV6 458 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 ZNF517Q6ZMY9 492 aaPredicted RBP4.59□□□□□ -1.67
SNCA-213ENST00000618500 ZC3H18Q86VM9 953 aaKnown RBP4.59□□□□□ -1.67
SNCA-213ENST00000618500 DNAAF5Q86Y56 855 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 HID1Q8IV36 788 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 OR10G6Q8NH81 332 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 PDXPQ96GD0 296 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 PPP1R13BQ96KQ4 1090 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 COQ10AQ96MF6 247 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms