RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 TPSB2P20231 275 aa22.76■■□□□ 1.23
CBWD3-213ENST00000618217 BCKDHBP21953 392 aa22.76■■□□□ 1.23
CBWD3-213ENST00000618217 XPAP23025 273 aaPredicted RBP22.76■■□□□ 1.23
CBWD3-213ENST00000618217 GRIA1P42261 906 aa22.76■■□□□ 1.23
CBWD3-213ENST00000618217 CDK16Q00536 496 aa22.76■■□□□ 1.23
CBWD3-213ENST00000618217 ELP6Q0PNE2 266 aa22.76■■□□□ 1.23
CBWD3-213ENST00000618217 RALGDSQ12967 914 aa22.76■■□□□ 1.23
CBWD3-213ENST00000618217 TPSAB1Q15661 275 aa22.76■■□□□ 1.23
CBWD3-213ENST00000618217 CDKN3Q16667 212 aa22.76■■□□□ 1.23
CBWD3-213ENST00000618217 TMEM52BQ4KMG9 183 aa22.76■■□□□ 1.23
CBWD3-213ENST00000618217 RNASEH2BQ5TBB1 312 aaKnown RBP22.76■■□□□ 1.23
CBWD3-213ENST00000618217 ANKRD22Q5VYY1 191 aa22.76■■□□□ 1.23
CBWD3-213ENST00000618217 NAPEPLDQ6IQ20 393 aa22.76■■□□□ 1.23
CBWD3-213ENST00000618217 DPPA4Q7L190 304 aa22.76■■□□□ 1.23
CBWD3-213ENST00000618217 SLC25A41Q8N5S1 370 aa22.76■■□□□ 1.23
CBWD3-213ENST00000618217 OR2T34Q8NGX1 318 aa22.76■■□□□ 1.23
CBWD3-213ENST00000618217 PREBQ9HCU5 417 aa22.76■■□□□ 1.23
CBWD3-213ENST00000618217 B4GALT6Q9UBX8 382 aa22.76■■□□□ 1.23
CBWD3-213ENST00000618217 SPAG17Q6Q759 2223 aa22.76■■□□□ 1.23
CBWD3-213ENST00000618217 TP73O15350 636 aa22.75■■□□□ 1.23
CBWD3-213ENST00000618217 TSPAN6O43657 245 aa22.75■■□□□ 1.23
CBWD3-213ENST00000618217 LILRB5O75023 590 aa22.75■■□□□ 1.23
CBWD3-213ENST00000618217 FGF1P05230 155 aa22.75■■□□□ 1.23
CBWD3-213ENST00000618217 FAM193AP78312 1265 aa22.75■■□□□ 1.23
CBWD3-213ENST00000618217 SRSF5Q13243 272 aaKnown RBP22.75■■□□□ 1.23
CBWD3-213ENST00000618217 CCDC70Q6NSX1 233 aa22.75■■□□□ 1.23
CBWD3-213ENST00000618217 ERAP2Q6P179 960 aa22.75■■□□□ 1.23
CBWD3-213ENST00000618217 USP45Q70EL2 814 aa22.75■■□□□ 1.23
CBWD3-213ENST00000618217 CBARPQ8N350 705 aaPredicted RBP22.75■■□□□ 1.23
CBWD3-213ENST00000618217 SPACA7Q96KW9 195 aa22.75■■□□□ 1.23
CBWD3-213ENST00000618217 TPX2Q9ULW0 747 aaKnown RBP22.75■■□□□ 1.23
CBWD3-213ENST00000618217 PCDHGA2Q9Y5H1 932 aa22.75■■□□□ 1.23
CBWD3-213ENST00000618217 DNALI1O14645 258 aaPredicted RBP22.75■■□□□ 1.23
CBWD3-213ENST00000618217 RPP40O75818 363 aaKnown RBP22.75■■□□□ 1.23
CBWD3-213ENST00000618217 LHCGRP22888 699 aa22.75■■□□□ 1.23
CBWD3-213ENST00000618217 DUPD1Q68J44 220 aa22.75■■□□□ 1.23
CBWD3-213ENST00000618217 C8orf74Q6P047 294 aa22.75■■□□□ 1.23
CBWD3-213ENST00000618217 NEK5Q6P3R8 708 aa22.75■■□□□ 1.23
CBWD3-213ENST00000618217 LINC00523Q86TU6 105 aa22.75■■□□□ 1.23
CBWD3-213ENST00000618217 NDUFAF2Q8N183 169 aa22.75■■□□□ 1.23
CBWD3-213ENST00000618217 NAT8LQ8N9F0 302 aa22.75■■□□□ 1.23
CBWD3-213ENST00000618217 GPR174Q9BXC1 333 aa22.75■■□□□ 1.23
CBWD3-213ENST00000618217 C6orf106Q9H6K1 298 aaPredicted RBP22.75■■□□□ 1.23
CBWD3-213ENST00000618217 MAGEE1Q9HCI5 957 aa22.75■■□□□ 1.23
CBWD3-213ENST00000618217 SPO11Q9Y5K1 396 aa22.75■■□□□ 1.23
CBWD3-213ENST00000618217 THADAQ6YHU6 1953 aa22.74■■□□□ 1.23
CBWD3-213ENST00000618217 MYLKQ15746 1914 aa22.74■■□□□ 1.23
CBWD3-213ENST00000618217 A0A0U1RQS6 177 aa22.74■■□□□ 1.23
CBWD3-213ENST00000618217 LRRC72A6NJI9 287 aa22.74■■□□□ 1.23
CBWD3-213ENST00000618217 EFCAB8A8MWE9 144 aa22.74■■□□□ 1.23
CBWD3-213ENST00000618217 A8MX80 341 aa22.74■■□□□ 1.23
CBWD3-213ENST00000618217 TMEM63AO94886 807 aa22.74■■□□□ 1.23
CBWD3-213ENST00000618217 PIRTP0C851 137 aa22.74■■□□□ 1.23
CBWD3-213ENST00000618217 VIPR1P32241 457 aa22.74■■□□□ 1.23
CBWD3-213ENST00000618217 CNR2P34972 360 aa22.74■■□□□ 1.23
CBWD3-213ENST00000618217 RPL21P46778 160 aaKnown RBP22.74■■□□□ 1.23
CBWD3-213ENST00000618217 LMAN1P49257 510 aa22.74■■□□□ 1.23
CBWD3-213ENST00000618217 TERF1P54274 439 aa22.74■■□□□ 1.23
CBWD3-213ENST00000618217 TCF15Q12870 199 aa22.74■■□□□ 1.23
CBWD3-213ENST00000618217 CRTC1Q6UUV9 634 aa22.74■■□□□ 1.23
CBWD3-213ENST00000618217 SLC36A4Q6YBV0 504 aa22.74■■□□□ 1.23
CBWD3-213ENST00000618217 ZNF534Q76KX8 674 aa22.74■■□□□ 1.23
CBWD3-213ENST00000618217 TSPAN33Q86UF1 283 aa22.74■■□□□ 1.23
CBWD3-213ENST00000618217 PRSS33Q8NF86 280 aa22.74■■□□□ 1.23
CBWD3-213ENST00000618217 PRRX2Q99811 253 aa22.74■■□□□ 1.23
CBWD3-213ENST00000618217 CASS4Q9NQ75 786 aa22.74■■□□□ 1.23
CBWD3-213ENST00000618217 ZFR2Q9UPR6 939 aaKnown RBP22.74■■□□□ 1.23
CBWD3-213ENST00000618217 TBC1D3DA0A087WVF3 549 aa22.73■■□□□ 1.23
CBWD3-213ENST00000618217 TBC1D3IA0A087WXS9 549 aa22.73■■□□□ 1.23
CBWD3-213ENST00000618217 TBC1D3EA0A087X179 549 aa22.73■■□□□ 1.23
CBWD3-213ENST00000618217 TBC1D3KA0A087X1G2 549 aa22.73■■□□□ 1.23
CBWD3-213ENST00000618217 TBC1D3FA6NER0 549 aaPredicted RBP22.73■■□□□ 1.23
CBWD3-213ENST00000618217 TBC1D3LB9A6J9 549 aa22.73■■□□□ 1.23
CBWD3-213ENST00000618217 BHMG1C9JSJ3 638 aaPredicted RBP22.73■■□□□ 1.23
CBWD3-213ENST00000618217 SEC31AO94979 1220 aaKnown RBP22.73■■□□□ 1.23
CBWD3-213ENST00000618217 TBC1D3HP0C7X1 549 aa22.73■■□□□ 1.23
CBWD3-213ENST00000618217 NFKBIAP25963 317 aa22.73■■□□□ 1.23
CBWD3-213ENST00000618217 TNNT3P45378 269 aaPredicted RBP22.73■■□□□ 1.23
CBWD3-213ENST00000618217 TMEM259Q4ZIN3 620 aa22.73■■□□□ 1.23
CBWD3-213ENST00000618217 IZUMO3Q5VZ72 239 aa22.73■■□□□ 1.23
CBWD3-213ENST00000618217 TBC1D3GQ6DHY5 549 aa22.73■■□□□ 1.23
CBWD3-213ENST00000618217 TBC1D3CQ6IPX1 549 aa22.73■■□□□ 1.23
CBWD3-213ENST00000618217 LIPIQ6XZB0 460 aa22.73■■□□□ 1.23
CBWD3-213ENST00000618217 TRIM69Q86WT6 500 aa22.73■■□□□ 1.23
CBWD3-213ENST00000618217 PPIL6Q8IXY8 311 aa22.73■■□□□ 1.23
CBWD3-213ENST00000618217 TBC1D3Q8IZP1 549 aaPredicted RBP22.73■■□□□ 1.23
CBWD3-213ENST00000618217 OR52K1Q8NGK4 314 aa22.73■■□□□ 1.23
CBWD3-213ENST00000618217 TRIM31Q9BZY9 425 aa22.73■■□□□ 1.23
CBWD3-213ENST00000618217 PCED1AQ9H1Q7 454 aa22.73■■□□□ 1.23
CBWD3-213ENST00000618217 FAM47DPA6NHR8 397 aa22.72■■□□□ 1.23
CBWD3-213ENST00000618217 H0Y858 1186 aa22.72■■□□□ 1.23
CBWD3-213ENST00000618217 NEMP1O14524 444 aa22.72■■□□□ 1.23
CBWD3-213ENST00000618217 RNGTTO60942 597 aaKnown RBP22.72■■□□□ 1.23
CBWD3-213ENST00000618217 HEXIM1O94992 359 aaKnown RBP22.72■■□□□ 1.23
CBWD3-213ENST00000618217 PCDH8O95206 1070 aa22.72■■□□□ 1.23
CBWD3-213ENST00000618217 CYP2A6P11509 494 aaPredicted RBP22.72■■□□□ 1.23
CBWD3-213ENST00000618217 LIG3P49916 1009 aa22.72■■□□□ 1.23
CBWD3-213ENST00000618217 PPP2CBP62714 309 aa22.72■■□□□ 1.23
CBWD3-213ENST00000618217 PPP2CAP67775 309 aa22.72■■□□□ 1.23
CBWD3-213ENST00000618217 SLC7A5Q01650 507 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms