RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 LIPMQ5VYY2 423 aa11.21□□□□□ -0.62
CCDC144B-208ENST00000618081 TCAIMQ8N3R3 496 aa11.21□□□□□ -0.62
CCDC144B-208ENST00000618081 ETNPPLQ8TBG4 499 aa11.21□□□□□ -0.62
CCDC144B-208ENST00000618081 COX4I2Q96KJ9 171 aa11.21□□□□□ -0.62
CCDC144B-208ENST00000618081 PANX1Q96RD7 426 aa11.21□□□□□ -0.62
CCDC144B-208ENST00000618081 GPER1Q99527 375 aa11.21□□□□□ -0.62
CCDC144B-208ENST00000618081 MKL2Q9ULH7 1088 aa11.21□□□□□ -0.62
CCDC144B-208ENST00000618081 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.21□□□□□ -0.62
CCDC144B-208ENST00000618081 CNTRLQ7Z7A1 2325 aa11.21□□□□□ -0.62
CCDC144B-208ENST00000618081 RBL1P28749 1068 aa11.21□□□□□ -0.62
CCDC144B-208ENST00000618081 CNTN2Q02246 1040 aa11.21□□□□□ -0.62
CCDC144B-208ENST00000618081 SF1Q15637 639 aaKnown RBP11.21□□□□□ -0.62
CCDC144B-208ENST00000618081 POU5F2Q8N7G0 328 aa11.21□□□□□ -0.62
CCDC144B-208ENST00000618081 OR52K1Q8NGK4 314 aa11.21□□□□□ -0.62
CCDC144B-208ENST00000618081 ACMSDQ8TDX5 336 aa11.21□□□□□ -0.62
CCDC144B-208ENST00000618081 RAD51AP1Q96B01 352 aa11.21□□□□□ -0.62
CCDC144B-208ENST00000618081 GLIS2Q9BZE0 524 aaPredicted RBP11.21□□□□□ -0.62
CCDC144B-208ENST00000618081 TM6SF2Q9BZW4 377 aa11.21□□□□□ -0.62
CCDC144B-208ENST00000618081 SEMA6AQ9H2E6 1030 aa11.21□□□□□ -0.62
CCDC144B-208ENST00000618081 CRISPLD1Q9H336 500 aa11.21□□□□□ -0.62
CCDC144B-208ENST00000618081 GIT1Q9Y2X7 761 aa11.21□□□□□ -0.62
CCDC144B-208ENST00000618081 TEX46H3BTG2 121 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 FFAR3O14843 346 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 HAT1O14929 419 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 GPR42O15529 346 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 TRUB2O95900 331 aaKnown RBP11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 AKT2P31751 481 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 GRIA4P48058 902 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 ABRQ12979 859 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 VGLL4Q14135 290 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 TMEM119Q4V9L6 283 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 ELOVL2Q9NXB9 296 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 FAM86C2PA6NEL3 165 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 FGF1P05230 155 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 PECAM1P16284 738 aaPredicted RBP11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 VBP1P61758 197 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 ATP13A5Q4VNC0 1218 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 FAM183BPQ6ZVS7 135 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 JAZF1Q86VZ6 243 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 KBTBD8Q8NFY9 601 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 OR10H5Q8NGA6 315 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 SERPINA1P01009 418 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 ADRA1DP25100 572 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 NOL6Q9H6R4 1146 aaKnown RBP11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 DEPDC5O75140 1603 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 GRM6O15303 877 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 OR5F1O95221 314 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 GLI1P08151 1106 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 ATP5F1P24539 256 aaPredicted RBP11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 RAPSNQ13702 412 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 MAP4K3Q8IVH8 894 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 IPCEF1Q8WWN9 437 aaPredicted RBP11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 CLP1Q92989 425 aaKnown RBP11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 ZNF670Q9BS34 389 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 TBC1D14Q9P2M4 693 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 ADM5C9JUS6 153 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 CHP2O43745 196 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 TCEA3O75764 348 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 ITGA3P26006 1051 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 FAAP100Q0VG06 881 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 ZMYND11Q15326 602 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 SNAP47Q5SQN1 464 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 SLC4A11Q8NBS3 891 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 PIWIL2Q8TC59 973 aaKnown RBP11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 TIFAQ96CG3 184 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 DCUN1D5Q9BTE7 237 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 GRIP2Q9C0E4 1043 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 ARMCX1Q9P291 453 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 COPS7AQ9UBW8 275 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 A0A1W2PQ72 361 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 RFXANKO14593 260 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 PGRMC2O15173 223 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 USP12O75317 370 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 SCNN1GP51170 649 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 MRPS22P82650 360 aaKnown RBP11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 PPIDQ08752 370 aaKnown RBP11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 BNIP2Q12982 314 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 ACTL7BQ9Y614 415 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 NEDD8-MDP1E9PL57 170 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 GLUD1P00367 558 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 ARHGAP36Q6ZRI8 547 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 NET1Q7Z628 596 aaPredicted RBP11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 TAF8Q7Z7C8 310 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 TRIM2Q9C040 744 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 BPIFA1Q9NP55 256 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 OGDHLQ9ULD0 1010 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 ING4Q9UNL4 249 aa11.2□□□□□ -0.62
CCDC144B-208ENST00000618081 IFT172Q9UG01 1749 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 FAM25EA8MYX2 175 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 SHMT1P34896 483 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 MAMLD1Q13495 774 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 UBR7Q8N806 425 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 OR52E6Q96RD3 313 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 SEMA3CQ99985 751 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 AIF1LQ9BQI0 150 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 ZNF222Q9UK12 451 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 AIF1P55008 147 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 DCTN2Q13561 401 aaKnown RBP11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 TEAD4Q15561 434 aa11.19□□□□□ -0.62
CCDC144B-208ENST00000618081 ZCCHC23Q6ZST2 131 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms