RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 SLC9A1P19634 815 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 ZFP36P26651 326 aaKnown RBP4.77□□□□□ -1.65
CUL3-216ENST00000617432 KLK7P49862 253 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 TKTL1P51854 596 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 ZNF132P52740 706 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 BPIFB4P59827 614 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 PITX1P78337 314 aaPredicted RBP4.77□□□□□ -1.65
CUL3-216ENST00000617432 ENPEPQ07075 957 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 GRSF1Q12849 480 aaKnown RBP eCLIP4.77□□□□□ -1.65
CUL3-216ENST00000617432 DMC1Q14565 340 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 ANO4Q32M45 955 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 ZNF528Q3MIS6 628 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 RAB41Q5JT25 222 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 DGKKQ5KSL6 1271 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 C10orf120Q5SQS8 335 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 SNX30Q5VWJ9 437 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 EGFLAMQ63HQ2 1017 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 TCEAL6Q6IPX3 200 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 PMF1Q6P1K2 205 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 TMEM270Q6UE05 265 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 CCDC186Q7Z3E2 898 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 KBTBD6Q86V97 674 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 PASD1Q8IV76 773 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 ANKRD53Q8N9V6 530 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 RLN3Q8WXF3 142 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 OVCA2Q8WZ82 227 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 TCEAL3Q969E4 200 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 GFM2Q969S9 779 aaKnown RBP4.77□□□□□ -1.65
CUL3-216ENST00000617432 MSANTD3Q96H12 275 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 TRIM55Q9BYV6 548 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 NACA2Q9H009 215 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 SIX2Q9NPC8 291 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 PLCB1Q9NQ66 1216 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 FSCN3Q9NQT6 498 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 TLR8Q9NR97 1041 aaKnown RBP4.77□□□□□ -1.65
CUL3-216ENST00000617432 LMBRD1Q9NUN5 540 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 SAE1Q9UBE0 346 aaPredicted RBP4.77□□□□□ -1.65
CUL3-216ENST00000617432 SFMBT1Q9UHJ3 866 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 MAGEL2Q9UJ55 1249 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 PCDHGA2Q9Y5H1 932 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 RAD54BQ9Y620 910 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.77□□□□□ -1.65
CUL3-216ENST00000617432 DNAH14Q0VDD8 3507 aa4.77□□□□□ -1.65
CUL3-216ENST00000617432 ARHGEF17Q96PE2 2063 aaPredicted RBP4.77□□□□□ -1.65
CUL3-216ENST00000617432 FRYLO94915 3013 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 DMXL1Q9Y485 3027 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 MUC22E2RYF6 1773 aaPredicted RBP4.76□□□□□ -1.65
CUL3-216ENST00000617432 ATXN2Q99700 1313 aaKnown RBP4.76□□□□□ -1.65
CUL3-216ENST00000617432 GOLGA6L7A0A1B0GV03 622 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 SLC12A8A0AV02 714 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 E2F8A0AVK6 867 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 MED19A0JLT2 244 aaPredicted RBP4.76□□□□□ -1.65
CUL3-216ENST00000617432 DNAJC9-AS1A6NH13 148 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 WASH3PC4AMC7 463 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 XPO1O14980 1071 aaKnown RBP4.76□□□□□ -1.65
CUL3-216ENST00000617432 TSPAN3O60637 253 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 KAT7O95251 611 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 PAPSS2O95340 614 aaPredicted RBP4.76□□□□□ -1.65
CUL3-216ENST00000617432 CRTAMO95727 393 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 AFPP02771 609 aaKnown RBP4.76□□□□□ -1.65
CUL3-216ENST00000617432 FYNP06241 537 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 CORO1AP31146 461 aaKnown RBP4.76□□□□□ -1.65
CUL3-216ENST00000617432 ATP5C1P36542 298 aaKnown RBP4.76□□□□□ -1.65
CUL3-216ENST00000617432 MAGEA9P43362 315 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 TUBP50607 506 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 DAOAP59103 153 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 YWHAGP61981 247 aaKnown RBP eCLIP4.76□□□□□ -1.65
CUL3-216ENST00000617432 ADAM8P78325 824 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 GABREP78334 506 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 STIM1Q13586 685 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 SIM2Q14190 667 aaPredicted RBP4.76□□□□□ -1.65
CUL3-216ENST00000617432 SF3A2Q15428 464 aaKnown RBP4.76□□□□□ -1.65
CUL3-216ENST00000617432 TAF5Q15542 800 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 ARHGAP44Q17R89 818 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 GEN1Q17RS7 908 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 FAM209AQ5JX71 171 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 ANO7Q6IWH7 933 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 C11orf57Q6ZUT1 292 aaPredicted RBP4.76□□□□□ -1.65
CUL3-216ENST00000617432 WDR5BQ86VZ2 330 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 LONP2Q86WA8 852 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 CACUL1Q86Y37 369 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 DENND1CQ8IV53 801 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 DEFB119Q8N690 84 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 IL17RCQ8NAC3 791 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 ANKRD52Q8NB46 1076 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 CCDC150Q8NCX0 1101 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 SIMC1Q8NDZ2 872 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 WFDC5Q8TCV5 224 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 ATRIPQ8WXE1 791 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 SORCS1Q8WY21 1168 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 ZNF669Q96BR6 464 aaPredicted RBP4.76□□□□□ -1.65
CUL3-216ENST00000617432 CEP295NLQ96MC4 621 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 COQ10AQ96MF6 247 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 NT5C1BQ96P26 610 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 KRTAP2-2Q9BYT5 123 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 SLC29A3Q9BZD2 475 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 MIS12Q9H081 205 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 FBXO44Q9H4M3 255 aa4.76□□□□□ -1.65
CUL3-216ENST00000617432 METTL14Q9HCE5 456 aaKnown RBP4.76□□□□□ -1.65
CUL3-216ENST00000617432 SPHK2Q9NRA0 654 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms