RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 OR6C4Q8NGE1 309 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 SNIP1Q8TAD8 396 aaKnown RBP9.73□□□□□ -0.85
TARDBP-218ENST00000617172 WDR92Q96MX6 357 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 ZNF578Q96N58 590 aaPredicted RBP9.73□□□□□ -0.85
TARDBP-218ENST00000617172 CSPG4P5Q96PW8 444 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 LRRC61Q9BV99 259 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 NUP85Q9BW27 656 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 THAP2Q9H0W7 228 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 HAUS2Q9NVX0 235 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 ANAPC7Q9UJX3 599 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 RALYQ9UKM9 306 aaKnown RBP9.73□□□□□ -0.85
TARDBP-218ENST00000617172 COQ6Q9Y2Z9 468 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 DGKBQ9Y6T7 804 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 U3KQA8 63 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 URB1O60287 2271 aaKnown RBP9.73□□□□□ -0.85
TARDBP-218ENST00000617172 ACACAQ13085 2346 aa9.73□□□□□ -0.85
TARDBP-218ENST00000617172 CELSR3Q9NYQ7 3312 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 CACNB4O00305 520 aaPredicted RBP9.72□□□□□ -0.85
TARDBP-218ENST00000617172 TNFRSF10CO14798 259 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 HTRA2O43464 458 aaPredicted RBP9.72□□□□□ -0.85
TARDBP-218ENST00000617172 BRINP1O60477 761 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 MAFKO60675 156 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 SOCS5O75159 536 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 USP12O75317 370 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 DXOO77932 396 aaKnown RBP9.72□□□□□ -0.85
TARDBP-218ENST00000617172 TNFP01375 233 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 CES1P23141 567 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 HNRNPH3P31942 346 aaKnown RBP9.72□□□□□ -0.85
TARDBP-218ENST00000617172 TRIM23P36406 574 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 ABCG1P45844 678 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 LSSP48449 732 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 ERVPABLB-1P60509 514 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 C1orf61Q13536 156 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 KRT81Q14533 505 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 ISXQ2M1V0 245 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 CCDC122Q5T0U0 273 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 GUSBP11Q6P575 273 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 ARHGAP36Q6ZRI8 547 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 DPPA4Q7L190 304 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 EFL1Q7Z2Z2 1120 aaKnown RBP9.72□□□□□ -0.85
TARDBP-218ENST00000617172 ZSWIM9Q86XI8 627 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 MAP7D3Q8IWC1 876 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 RBFAQ8N0V3 343 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 NDUFAF2Q8N183 169 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 ATPAF2Q8N5M1 289 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 TSACCQ96A04 125 aaPredicted RBP9.72□□□□□ -0.85
TARDBP-218ENST00000617172 DCBLD2Q96PD2 775 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 NUDCD1Q96RS6 583 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 CLPBQ9H078 707 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 TCEAL2Q9H3H9 227 aaPredicted RBP9.72□□□□□ -0.85
TARDBP-218ENST00000617172 POLR1BQ9H9Y6 1135 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 PCDH18Q9HCL0 1135 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 UVRAGQ9P2Y5 699 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 KLQ9UEF7 1012 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 PADI4Q9UM07 663 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 PHTF1Q9UMS5 762 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 OR1A2Q9Y585 309 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 LAMA5O15230 3695 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 APC2O95996 2303 aa9.72□□□□□ -0.85
TARDBP-218ENST00000617172 MUSKO15146 869 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 CBFA2T2O43439 604 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 CSO75390 466 aaKnown RBP9.71□□□□□ -0.86
TARDBP-218ENST00000617172 PEX11BO96011 259 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 GYPCP04921 128 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 PCCBP05166 539 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 KRT7P08729 469 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 H2AFZP0C0S5 128 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 CYP2A6P11509 494 aaPredicted RBP9.71□□□□□ -0.86
TARDBP-218ENST00000617172 MYF5P13349 255 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 TCF4P15884 667 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 CR2P20023 1033 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 TGM2P21980 687 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 CASP14P31944 242 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 SSR1P43307 286 aaKnown RBP9.71□□□□□ -0.86
TARDBP-218ENST00000617172 MMP13P45452 471 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 KIAA1024LP59773 190 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 SLC25A11Q02978 314 aaKnown RBP9.71□□□□□ -0.86
TARDBP-218ENST00000617172 RALGDSQ12967 914 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 TRIM14Q14142 442 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 ACOX1Q15067 660 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 PDK2Q15119 407 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 TSR1Q2NL82 804 aaKnown RBP9.71□□□□□ -0.86
TARDBP-218ENST00000617172 ALG11Q2TAA5 492 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 TBC1D25Q3MII6 688 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 TIGD7Q6NT04 549 aaPredicted RBP9.71□□□□□ -0.86
TARDBP-218ENST00000617172 PNCKQ6P2M8 343 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 IGF2-ASQ6U949 168 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 RBM44Q6ZP01 1051 aaKnown RBP9.71□□□□□ -0.86
TARDBP-218ENST00000617172 H2AFVQ71UI9 128 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 RD3Q7Z3Z2 195 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 SLC35F3Q8IY50 421 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 ARL10Q8N8L6 244 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 KCTD6Q8NC69 237 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 OR8K1Q8NGG5 319 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 OR56A4Q8NGH8 313 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 ZNF564Q8TBZ8 553 aaPredicted RBP9.71□□□□□ -0.86
TARDBP-218ENST00000617172 FAM71BQ8TC56 605 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 PDCD6IPQ8WUM4 868 aaKnown RBP9.71□□□□□ -0.86
TARDBP-218ENST00000617172 SCRN2Q96FV2 425 aa9.71□□□□□ -0.86
TARDBP-218ENST00000617172 RBM15Q96T37 977 aaKnown RBP eCLIP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms