RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 LINGO4Q6UY18 593 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 LEKR1Q6ZMV7 388 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 KANSL1Q7Z3B3 1105 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 SPATS2Q86XZ4 545 aaKnown RBP15.02■□□□□ -0
UBXN1-218ENST00000616865 CCDC13Q8IYE1 715 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 TBC1D3Q8IZP1 549 aaPredicted RBP15.02■□□□□ -0
UBXN1-218ENST00000616865 MFSD2AQ8NA29 543 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 ATP11CQ8NB49 1132 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 C1orf54Q8WWF1 131 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 HDAC11Q96DB2 347 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 ALG14Q96F25 216 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 AP1M1Q9BXS5 423 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 KDM4CQ9H3R0 1056 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 HAUS2Q9NVX0 235 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 SMARCAL1Q9NZC9 954 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 AK5Q9Y6K8 562 aa15.02■□□□□ -0
UBXN1-218ENST00000616865 J3KR12 359 aa15.01□□□□□ -0.01
UBXN1-218ENST00000616865 FANCGO15287 622 aa15.01□□□□□ -0.01
UBXN1-218ENST00000616865 SLC7A4O43246 635 aa15.01□□□□□ -0.01
UBXN1-218ENST00000616865 MTSS1O43312 755 aa15.01□□□□□ -0.01
UBXN1-218ENST00000616865 PLRG1O43660 514 aaKnown RBP15.01□□□□□ -0.01
UBXN1-218ENST00000616865 ZNF189O75820 626 aaPredicted RBP15.01□□□□□ -0.01
UBXN1-218ENST00000616865 RBP3P10745 1247 aa15.01□□□□□ -0.01
UBXN1-218ENST00000616865 CCNCP24863 283 aa15.01□□□□□ -0.01
UBXN1-218ENST00000616865 METAP1P53582 386 aa15.01□□□□□ -0.01
UBXN1-218ENST00000616865 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.01□□□□□ -0.01
UBXN1-218ENST00000616865 LRRC69Q6ZNQ3 347 aa15.01□□□□□ -0.01
UBXN1-218ENST00000616865 ARHGAP36Q6ZRI8 547 aa15.01□□□□□ -0.01
UBXN1-218ENST00000616865 PRPF39Q86UA1 669 aaKnown RBP15.01□□□□□ -0.01
UBXN1-218ENST00000616865 IQCHQ86VS3 1027 aa15.01□□□□□ -0.01
UBXN1-218ENST00000616865 SNIP1Q8TAD8 396 aaKnown RBP15.01□□□□□ -0.01
UBXN1-218ENST00000616865 ATG4AQ8WYN0 398 aa15.01□□□□□ -0.01
UBXN1-218ENST00000616865 TSGA13Q96PP4 275 aa15.01□□□□□ -0.01
UBXN1-218ENST00000616865 QKIQ96PU8 341 aaKnown RBP eCLIP15.01□□□□□ -0.01
UBXN1-218ENST00000616865 LGMNQ99538 433 aa15.01□□□□□ -0.01
UBXN1-218ENST00000616865 PRORYQ9H606 182 aa15.01□□□□□ -0.01
UBXN1-218ENST00000616865 CDC23Q9UJX2 597 aa15.01□□□□□ -0.01
UBXN1-218ENST00000616865 ZNF148Q9UQR1 794 aa15.01□□□□□ -0.01
UBXN1-218ENST00000616865 DMTF1Q9Y222 760 aa15.01□□□□□ -0.01
UBXN1-218ENST00000616865 R3HDM2Q9Y2K5 976 aaKnown RBP15.01□□□□□ -0.01
UBXN1-218ENST00000616865 RRP8O43159 456 aaKnown RBP15□□□□□ -0.01
UBXN1-218ENST00000616865 MAFKO60675 156 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 MAGEC1O60732 1142 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 PRB1P04280 392 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 CKMT2P17540 419 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 MAT2AP31153 395 aaKnown RBP15□□□□□ -0.01
UBXN1-218ENST00000616865 NUDT1P36639 197 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 RENBPP51606 427 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 PPIDQ08752 370 aaKnown RBP15□□□□□ -0.01
UBXN1-218ENST00000616865 OVGP1Q12889 678 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 ZNF235Q14590 738 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 RFTN1Q14699 578 aaPredicted RBP15□□□□□ -0.01
UBXN1-218ENST00000616865 CCNG2Q16589 344 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 TMCO4Q5TGY1 634 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 MARC1Q5VT66 337 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 AGBL4Q5VU57 503 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 B4GALNT4Q76KP1 1039 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 DSG4Q86SJ6 1040 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 TRIM69Q86WT6 500 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 CREG2Q8IUH2 290 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 FRS2Q8WU20 508 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 LRRN4Q8WUT4 740 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 CASKIN2Q8WXE0 1202 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 OR8D1Q8WZ84 308 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 MAGOHBQ96A72 148 aaKnown RBP15□□□□□ -0.01
UBXN1-218ENST00000616865 CCDC114Q96M63 670 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 ZNF599Q96NL3 588 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 OLFM3Q96PB7 478 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 CINPQ9BW66 212 aaPredicted RBP15□□□□□ -0.01
UBXN1-218ENST00000616865 SARDHQ9UL12 918 aa15□□□□□ -0.01
UBXN1-218ENST00000616865 DOCK9Q9BZ29 2069 aa14.99□□□□□ -0.01
UBXN1-218ENST00000616865 CFAP69A5D8W1 941 aa14.99□□□□□ -0.01
UBXN1-218ENST00000616865 TK2O00142 265 aa14.99□□□□□ -0.01
UBXN1-218ENST00000616865 MATN3O15232 486 aa14.99□□□□□ -0.01
UBXN1-218ENST00000616865 ATXN7O15265 892 aaPredicted RBP14.99□□□□□ -0.01
UBXN1-218ENST00000616865 LIASO43766 372 aa14.99□□□□□ -0.01
UBXN1-218ENST00000616865 SDC3O75056 442 aa14.99□□□□□ -0.01
UBXN1-218ENST00000616865 ZMPSTE24O75844 475 aa14.99□□□□□ -0.01
UBXN1-218ENST00000616865 CCNB1P14635 433 aa14.99□□□□□ -0.01
UBXN1-218ENST00000616865 ACP1P24666 158 aa14.99□□□□□ -0.01
UBXN1-218ENST00000616865 RECQLP46063 649 aaPredicted RBP14.99□□□□□ -0.01
UBXN1-218ENST00000616865 SERPINH1P50454 418 aaKnown RBP14.99□□□□□ -0.01
UBXN1-218ENST00000616865 VASPP50552 380 aaPredicted RBP14.99□□□□□ -0.01
UBXN1-218ENST00000616865 ARF5P84085 180 aa14.99□□□□□ -0.01
UBXN1-218ENST00000616865 LBRQ14739 615 aaKnown RBP14.99□□□□□ -0.01
UBXN1-218ENST00000616865 PRKD1Q15139 912 aaPredicted RBP14.99□□□□□ -0.01
UBXN1-218ENST00000616865 WHAMMP3Q1A5X7 153 aa14.99□□□□□ -0.01
UBXN1-218ENST00000616865 PROX2Q3B8N5 592 aa14.99□□□□□ -0.01
UBXN1-218ENST00000616865 GSTA5Q7RTV2 222 aa14.99□□□□□ -0.01
UBXN1-218ENST00000616865 CACTIN-AS1Q8N1I8 211 aa14.99□□□□□ -0.01
UBXN1-218ENST00000616865 SH2D3CQ8N5H7 860 aa14.99□□□□□ -0.01
UBXN1-218ENST00000616865 SLC39A7Q92504 469 aa14.99□□□□□ -0.01
UBXN1-218ENST00000616865 FCRL3Q96P31 734 aaPredicted RBP14.99□□□□□ -0.01
UBXN1-218ENST00000616865 SEPT3Q9UH03 358 aa14.99□□□□□ -0.01
UBXN1-218ENST00000616865 DNPEPQ9ULA0 475 aa14.99□□□□□ -0.01
UBXN1-218ENST00000616865 CLCA2Q9UQC9 943 aa14.99□□□□□ -0.01
UBXN1-218ENST00000616865 FARP1Q9Y4F1 1045 aaPredicted RBP14.99□□□□□ -0.01
UBXN1-218ENST00000616865 TTLL3Q9Y4R7 772 aa14.99□□□□□ -0.01
UBXN1-218ENST00000616865 CXorf51AA0A1B0GTR3 108 aa14.98□□□□□ -0.01
UBXN1-218ENST00000616865 C1QTNF3-AMACRE9PGA6 284 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms