RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 RBMS1P29558 406 aaKnown RBP19.1■□□□□ 0.65
CDX1-202ENST00000616154 BLKP51451 505 aa19.1■□□□□ 0.65
CDX1-202ENST00000616154 LRRC14Q15048 493 aa19.1■□□□□ 0.65
CDX1-202ENST00000616154 CA9Q16790 459 aa19.1■□□□□ 0.65
CDX1-202ENST00000616154 PCSK4Q6UW60 755 aa19.1■□□□□ 0.65
CDX1-202ENST00000616154 SLC46A1Q96NT5 459 aa19.1■□□□□ 0.65
CDX1-202ENST00000616154 DNAJC7Q99615 494 aa19.1■□□□□ 0.65
CDX1-202ENST00000616154 PDFQ9HBH1 243 aa19.1■□□□□ 0.65
CDX1-202ENST00000616154 COL6A6A6NMZ7 2263 aa19.1■□□□□ 0.65
CDX1-202ENST00000616154 PRPSAP2O60256 369 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 MFAP3LO75121 409 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 CYP1A2P05177 515 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 C6P13671 934 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 CASP14P31944 242 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 HCAR3P49019 387 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 HK3P52790 923 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 NDST2P52849 883 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 TPI1P60174 286 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 SKOR1P84550 965 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 AGERQ15109 404 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 UGP2Q16851 508 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 WSCD2Q2TBF2 565 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 AFMIDQ63HM1 303 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 ESRP1Q6NXG1 681 aaKnown RBP19.09■□□□□ 0.65
CDX1-202ENST00000616154 LVRNQ6Q4G3 990 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 TC2NQ8N9U0 490 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 PRR11Q96HE9 360 aaPredicted RBP19.09■□□□□ 0.65
CDX1-202ENST00000616154 ZNF641Q96N77 438 aaPredicted RBP19.09■□□□□ 0.65
CDX1-202ENST00000616154 CCDC3Q9BQI4 270 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 SUV39H2Q9H5I1 410 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 CPNE5Q9HCH3 593 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 PCDH12Q9NPG4 1184 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 GPATCH2LQ9NWQ4 482 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 PADI4Q9UM07 663 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 SSUH2Q9Y2M2 353 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 COQ6Q9Y2Z9 468 aa19.09■□□□□ 0.65
CDX1-202ENST00000616154 KLK10O43240 276 aa19.08■□□□□ 0.65
CDX1-202ENST00000616154 CELA2BP08218 269 aaPredicted RBP19.08■□□□□ 0.65
CDX1-202ENST00000616154 MLLT3P42568 568 aaPredicted RBP19.08■□□□□ 0.65
CDX1-202ENST00000616154 PDX1P52945 283 aa19.08■□□□□ 0.65
CDX1-202ENST00000616154 RHDQ02161 417 aa19.08■□□□□ 0.65
CDX1-202ENST00000616154 NFATC4Q14934 902 aa19.08■□□□□ 0.65
CDX1-202ENST00000616154 ELOCQ15369 112 aa19.08■□□□□ 0.65
CDX1-202ENST00000616154 DPYSL2Q16555 572 aa19.08■□□□□ 0.65
CDX1-202ENST00000616154 ALG11Q2TAA5 492 aa19.08■□□□□ 0.65
CDX1-202ENST00000616154 ERAP2Q6P179 960 aa19.08■□□□□ 0.65
CDX1-202ENST00000616154 ALKBH5Q6P6C2 394 aaKnown RBP19.08■□□□□ 0.65
CDX1-202ENST00000616154 BRAT1Q6PJG6 821 aa19.08■□□□□ 0.65
CDX1-202ENST00000616154 RFX8Q6ZV50 586 aa19.08■□□□□ 0.65
CDX1-202ENST00000616154 SDR16C5Q8N3Y7 309 aa19.08■□□□□ 0.65
CDX1-202ENST00000616154 ARL10Q8N8L6 244 aa19.08■□□□□ 0.65
CDX1-202ENST00000616154 WDR36Q8NI36 951 aaKnown RBP19.08■□□□□ 0.65
CDX1-202ENST00000616154 CPLX3Q8WVH0 158 aa19.08■□□□□ 0.65
CDX1-202ENST00000616154 SCG3Q8WXD2 468 aaKnown RBP19.08■□□□□ 0.65
CDX1-202ENST00000616154 TUBGCP5Q96RT8 1024 aa19.08■□□□□ 0.65
CDX1-202ENST00000616154 KCTD15Q96SI1 283 aaPredicted RBP19.08■□□□□ 0.65
CDX1-202ENST00000616154 THAP2Q9H0W7 228 aa19.08■□□□□ 0.65
CDX1-202ENST00000616154 DHX35Q9H5Z1 703 aaKnown RBP19.08■□□□□ 0.65
CDX1-202ENST00000616154 CDRT15L2A8MXV6 281 aa19.07■□□□□ 0.64
CDX1-202ENST00000616154 NTN3O00634 580 aaPredicted RBP19.07■□□□□ 0.64
CDX1-202ENST00000616154 PRAMEF11O60813 436 aa19.07■□□□□ 0.64
CDX1-202ENST00000616154 ALPIP09923 528 aa19.07■□□□□ 0.64
CDX1-202ENST00000616154 FECHP22830 423 aa19.07■□□□□ 0.64
CDX1-202ENST00000616154 HTR1BP28222 390 aa19.07■□□□□ 0.64
CDX1-202ENST00000616154 MMP12P39900 470 aa19.07■□□□□ 0.64
CDX1-202ENST00000616154 SPIDRQ14159 915 aa19.07■□□□□ 0.64
CDX1-202ENST00000616154 PIGHQ14442 188 aaPredicted RBP19.07■□□□□ 0.64
CDX1-202ENST00000616154 ASTE1Q2TB18 679 aaPredicted RBP19.07■□□□□ 0.64
CDX1-202ENST00000616154 HID1Q8IV36 788 aa19.07■□□□□ 0.64
CDX1-202ENST00000616154 CNGA4Q8IV77 575 aa19.07■□□□□ 0.64
CDX1-202ENST00000616154 ZNF843Q8N446 348 aa19.07■□□□□ 0.64
CDX1-202ENST00000616154 KYQ8NBH2 561 aa19.07■□□□□ 0.64
CDX1-202ENST00000616154 SPC24Q8NBT2 197 aa19.07■□□□□ 0.64
CDX1-202ENST00000616154 SNRNP27Q8WVK2 155 aaKnown RBP19.07■□□□□ 0.64
CDX1-202ENST00000616154 WBP1Q96G27 269 aa19.07■□□□□ 0.64
CDX1-202ENST00000616154 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.07■□□□□ 0.64
CDX1-202ENST00000616154 APOOQ9BUR5 198 aa19.07■□□□□ 0.64
CDX1-202ENST00000616154 MYO1AQ9UBC5 1043 aa19.07■□□□□ 0.64
CDX1-202ENST00000616154 PCSK1NQ9UHG2 260 aa19.07■□□□□ 0.64
CDX1-202ENST00000616154 DOLKQ9UPQ8 538 aa19.07■□□□□ 0.64
CDX1-202ENST00000616154 ATP8A1Q9Y2Q0 1164 aa19.07■□□□□ 0.64
CDX1-202ENST00000616154 CCDC187A0A096LP49 1063 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 PMS2P1A4D2B8 440 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 AKR1B15C9JRZ8 316 aaPredicted RBP19.06■□□□□ 0.64
CDX1-202ENST00000616154 J3KR12 359 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 EEF2KO00418 725 aaKnown RBP19.06■□□□□ 0.64
CDX1-202ENST00000616154 CASC3O15234 703 aaKnown RBP19.06■□□□□ 0.64
CDX1-202ENST00000616154 BUB1BO60566 1050 aaPredicted RBP19.06■□□□□ 0.64
CDX1-202ENST00000616154 RASGRP1O95267 797 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 TPM1P09493 284 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 CTSEP14091 401 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 IL1R2P27930 398 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 CSNK1DP48730 415 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 LIG3P49916 1009 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 GSDMDP57764 484 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 CFHR1Q03591 330 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 DPYSQ14117 519 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 INPP5AQ14642 412 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 BOLA3Q53S33 107 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 CFAP58Q5T655 872 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms