RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 LOXL4Q96JB6 756 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 ZC3H10Q96K80 434 aaKnown RBP8.09□□□□□ -1.11
PCDH9-205ENST00000614931 C9orf72Q96LT7 481 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 HHIPQ96QV1 700 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 FAM129BQ96TA1 746 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 HEPHQ9BQS7 1158 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 CDC42EP4Q9H3Q1 356 aaKnown RBP8.09□□□□□ -1.11
PCDH9-205ENST00000614931 ARNT2Q9HBZ2 717 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 LRRC4CQ9HCJ2 640 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 XAB2Q9HCS7 855 aaKnown RBP8.09□□□□□ -1.11
PCDH9-205ENST00000614931 CD248Q9HCU0 757 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 PRSS16Q9NQE7 514 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 MTRF1LQ9UGC7 380 aaKnown RBP8.09□□□□□ -1.11
PCDH9-205ENST00000614931 SARDHQ9UL12 918 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 MMP17Q9ULZ9 603 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 CHMP2BQ9UQN3 213 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 AAR2Q9Y312 384 aaKnown RBP8.09□□□□□ -1.11
PCDH9-205ENST00000614931 SPO11Q9Y5K1 396 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 TEX264Q9Y6I9 313 aa8.09□□□□□ -1.11
PCDH9-205ENST00000614931 RIF1Q5UIP0 2472 aaKnown RBP8.09□□□□□ -1.11
PCDH9-205ENST00000614931 PTPRZ1P23471 2315 aaPredicted RBP8.08□□□□□ -1.12
PCDH9-205ENST00000614931 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.08□□□□□ -1.12
PCDH9-205ENST00000614931 TSPAN11A1L157 253 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 CCDC78A2IDD5 438 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 GOLGA6CA6NDK9 693 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 GOLGA6BA6NDN3 693 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 PRR5-ARHGAP8B1AHC4 643 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 PLK4O00444 970 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 NDC80O14777 642 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 SPINT1O43278 529 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 LEFTY1O75610 366 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 POP4O95707 220 aaKnown RBP8.08□□□□□ -1.12
PCDH9-205ENST00000614931 EPHX1P07099 455 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 ALPIP09923 528 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 GOLGA6DP0CG33 693 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 CTPS1P17812 591 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 SDHBP21912 280 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 CES1P23141 567 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 MCM3P25205 808 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 SLC8A1P32418 973 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 NNMTP40261 264 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 ELK3P41970 407 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 MAGEA4P43358 317 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 DGKEP52429 567 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 ARHGAP8P85298 464 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 FOXK2Q01167 660 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 SEMG2Q02383 582 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 BCL2L1Q07817 233 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 CDH17Q12864 832 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 CAMK2GQ13555 558 aaPredicted RBP8.08□□□□□ -1.12
PCDH9-205ENST00000614931 PUM1Q14671 1186 aaKnown RBP eCLIP8.08□□□□□ -1.12
PCDH9-205ENST00000614931 CRY1Q16526 586 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 CSRP2Q16527 193 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 RSPO4Q2I0M5 234 aaPredicted RBP8.08□□□□□ -1.12
PCDH9-205ENST00000614931 POM121L1PQ3SYA9 428 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 PREPLQ4J6C6 727 aaPredicted RBP8.08□□□□□ -1.12
PCDH9-205ENST00000614931 CCDC38Q502W7 563 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 LRRC73Q5JTD7 316 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 DENND2CQ68D51 928 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 EMBQ6PCB8 327 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 TMEM92Q6UXU6 159 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 KBTBD6Q86V97 674 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 ZBED8Q8IZ13 594 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 TXNDC5Q8NBS9 432 aaKnown RBP8.08□□□□□ -1.12
PCDH9-205ENST00000614931 FBXO36Q8NEA4 188 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 TSTD1Q8NFU3 115 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 PDCD6IPQ8WUM4 868 aaKnown RBP8.08□□□□□ -1.12
PCDH9-205ENST00000614931 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.08□□□□□ -1.12
PCDH9-205ENST00000614931 ZNF778Q96MU6 729 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 KLHL32Q96NJ5 620 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 PPP1R2P1Q96PQ5 205 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 TUBGCP5Q96RT8 1024 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 GABRG3Q99928 467 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 FSD1LQ9BXM9 530 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 CPEB1Q9BZB8 566 aaKnown RBP8.08□□□□□ -1.12
PCDH9-205ENST00000614931 FOXP3Q9BZS1 431 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 PHACTR1Q9C0D0 580 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 SLC6A17Q9H1V8 727 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 SUV39H2Q9H5I1 410 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 ATP13A3Q9H7F0 1226 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 SEMA4GQ9NTN9 838 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 GOLGA6AQ9NYA3 693 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 IL36AQ9UHA7 158 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 PLA2G4CQ9UP65 541 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 KCTD3Q9Y597 815 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.08□□□□□ -1.12
PCDH9-205ENST00000614931 TRPM6Q9BX84 2022 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 GVINP1Q7Z2Y8 2422 aa8.08□□□□□ -1.12
PCDH9-205ENST00000614931 PLXND1Q9Y4D7 1925 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 DMXL1Q9Y485 3027 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 A0A1W2PQF6 199 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 AURKAO14965 403 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 ALOX15BO15296 676 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 EIF3HO15372 352 aaKnown RBP eCLIP8.07□□□□□ -1.12
PCDH9-205ENST00000614931 FOXD2O60548 495 aaPredicted RBP8.07□□□□□ -1.12
PCDH9-205ENST00000614931 SOCS5O75159 536 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 EPN2O95208 641 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 CPP00450 1065 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 C1QAP02745 245 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 FGF1P05230 155 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms