RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 VIPR2P41587 438 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 SLC1A6P48664 564 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 SLC18A1P54219 525 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 CDKN2DP55273 166 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 MSLNQ13421 630 aaPredicted RBP3.45□□□□□ -1.86
LIG4-205ENST00000614526 RCN2Q14257 317 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 ITIH4Q14624 930 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 SETDB1Q15047 1291 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 ZRANB3Q5FWF4 1079 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 ASTLQ6HA08 431 aaPredicted RBP3.45□□□□□ -1.86
LIG4-205ENST00000614526 CCDC149Q6ZUS6 474 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 TAS2R42Q7RTR8 314 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 CRLF3Q8IUI8 442 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 HJURPQ8NCD3 748 aaPredicted RBP3.45□□□□□ -1.86
LIG4-205ENST00000614526 ITFG1Q8TB96 612 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 PPP4R1Q8TF05 950 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 CYB5D2Q8WUJ1 264 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 ANKRD49Q8WVL7 239 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 C10orf82Q8WW14 230 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 CLP1Q92989 425 aaKnown RBP3.45□□□□□ -1.86
LIG4-205ENST00000614526 CCDC97Q96F63 343 aaPredicted RBP3.45□□□□□ -1.86
LIG4-205ENST00000614526 TSNARE1Q96NA8 513 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 KCNK13Q9HB14 408 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 RXFP1Q9HBX9 757 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 GPAMQ9HCL2 828 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 COPG2Q9UBF2 871 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 XPR1Q9UBH6 696 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 FKBPLQ9UIM3 349 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 INTS6Q9UL03 887 aaKnown RBP3.45□□□□□ -1.86
LIG4-205ENST00000614526 TBC1D30Q9Y2I9 924 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 ACOT9Q9Y305 439 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 USH1CQ9Y6N9 552 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 DOCK4Q8N1I0 1966 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 ANKRD66B4E2M5 251 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 CD3EAPO15446 510 aaKnown RBP3.45□□□□□ -1.86
LIG4-205ENST00000614526 DIAPH2O60879 1101 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 HSPA4LO95757 839 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 NDST3O95803 873 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 GLP2RO95838 553 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 FGF3P11487 239 aaPredicted RBP3.45□□□□□ -1.86
LIG4-205ENST00000614526 HNRNPLP14866 589 aaKnown RBP eCLIP3.45□□□□□ -1.86
LIG4-205ENST00000614526 ARSAP15289 507 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 PTPN2P17706 415 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 HLA-FP30511 346 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 CLCN4P51793 760 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 CSE1LP55060 971 aaKnown RBP3.45□□□□□ -1.86
LIG4-205ENST00000614526 RAB10P61026 200 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 ACTN3Q08043 901 aaPredicted RBP3.45□□□□□ -1.86
LIG4-205ENST00000614526 SHHQ15465 462 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 HSF5Q4G112 596 aaPredicted RBP3.45□□□□□ -1.86
LIG4-205ENST00000614526 LY6G5CQ5SRR4 150 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 HECTD2Q5U5R9 776 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 ATG16L1Q676U5 607 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 TIFABQ6ZNK6 161 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 SETD3Q86TU7 594 aaPredicted RBP3.45□□□□□ -1.86
LIG4-205ENST00000614526 CILP2Q8IUL8 1156 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 PIANPQ8IYJ0 282 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 CENPLQ8N0S6 344 aaPredicted RBP3.45□□□□□ -1.86
LIG4-205ENST00000614526 GRIN3AQ8TCU5 1115 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 HEXDCQ8WVB3 486 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 USP13Q92995 863 aaPredicted RBP3.45□□□□□ -1.86
LIG4-205ENST00000614526 KLHL29Q96CT2 875 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 CDKN2AIPNLQ96HQ2 116 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 GPR22Q99680 433 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 DDX50Q9BQ39 737 aaKnown RBP3.45□□□□□ -1.86
LIG4-205ENST00000614526 MGME1Q9BQP7 344 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 ACE2Q9BYF1 805 aaPredicted RBP3.45□□□□□ -1.86
LIG4-205ENST00000614526 GPR63Q9BZJ6 419 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 CIPCQ9C0C6 399 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 TDP1Q9NUW8 608 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 GALPQ9UBC7 116 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 ZFP69BQ9UJL9 534 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 PATJQ8NI35 1801 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 TANC1Q9C0D5 1861 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 DNAH14Q0VDD8 3507 aa3.45□□□□□ -1.86
LIG4-205ENST00000614526 NCF1BA6NI72 391 aaPredicted RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 A8MUI8 341 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 NCF1CA8MVU1 366 aaPredicted RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 TMEM233B4DJY2 109 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 G3V2L1 256 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 AP3B1O00203 1094 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 STX7O15400 261 aaKnown RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 ZMPSTE24O75844 475 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 S1PR4O95977 384 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 DLDP09622 509 aaKnown RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 NCF1P14598 390 aaPredicted RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 CEBPBP17676 345 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 UGT1A6P19224 532 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 HLA-DPA1P20036 260 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 UGT1A1P22309 533 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 UGT1A4P22310 534 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 KCNA5P22460 613 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 MPSTP25325 297 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 CDC25CP30307 473 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 UGT1A3P35503 534 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 UGT1A5P35504 534 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 HADHAP40939 763 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 KCNC1P48547 511 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 NRIP1P48552 1158 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 MESP2Q0VG99 397 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms