RNA–Protein interactions for RNA: ENST00000614484.4

SRRT-215, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-215ENST00000614484 VPS35Q96QK1 796 aa12.12□□□□□ -0.47
SRRT-215ENST00000614484 NEURL2Q9BR09 285 aa12.12□□□□□ -0.47
SRRT-215ENST00000614484 WDR6Q9NNW5 1121 aaKnown RBP12.12□□□□□ -0.47
SRRT-215ENST00000614484 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.12□□□□□ -0.477e-8■■□□□ 12.9
SRRT-215ENST00000614484 KCNN3Q9UGI6 736 aa12.12□□□□□ -0.47
SRRT-215ENST00000614484 DPP7Q9UHL4 492 aa12.12□□□□□ -0.47
SRRT-215ENST00000614484 LGALS13Q9UHV8 139 aa12.12□□□□□ -0.47
SRRT-215ENST00000614484 DCTN4Q9UJW0 460 aa12.12□□□□□ -0.47
SRRT-215ENST00000614484 DOLKQ9UPQ8 538 aa12.12□□□□□ -0.47
SRRT-215ENST00000614484 SLC8A2Q9UPR5 921 aa12.12□□□□□ -0.47
SRRT-215ENST00000614484 SMIM31A0A1B0GVY4 71 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 ARHGAP10A1A4S6 786 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 SLC4A1P02730 911 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 RPL10AP62906 217 aaKnown RBP12.11□□□□□ -0.47
SRRT-215ENST00000614484 SPDYAQ5MJ70 313 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 FCRLBQ6BAA4 426 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 BHLHA9Q7RTU4 235 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 ELMOD1Q8N336 334 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 ARFGAP1Q8N6T3 406 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 ITFG1Q8TB96 612 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 SGK3Q96BR1 496 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 MRPL38Q96DV4 380 aaKnown RBP12.11□□□□□ -0.47
SRRT-215ENST00000614484 FUBP3Q96I24 572 aaKnown RBP eCLIP12.11□□□□□ -0.47
SRRT-215ENST00000614484 AVENQ9NQS1 362 aaPredicted RBP12.11□□□□□ -0.47
SRRT-215ENST00000614484 ANLNQ9NQW6 1124 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 ARL8BQ9NVJ2 186 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 NINJ2Q9NZG7 142 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 DNMT3BQ9UBC3 853 aaKnown RBP12.11□□□□□ -0.47
SRRT-215ENST00000614484 EDARQ9UNE0 448 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 ACTL7BQ9Y614 415 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 DMDP11532 3685 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 TLR5O60602 858 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 PRMT3O60678 531 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 BAG2O95816 211 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 PRLP01236 227 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 SDC4P31431 198 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 CLK3P49761 638 aaKnown RBP12.11□□□□□ -0.47
SRRT-215ENST00000614484 ZBTB16Q05516 673 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 PLEKHA7Q6IQ23 1121 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 GIPC3Q8TF64 312 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 RNF139Q8WU17 664 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 SMG7Q92540 1137 aaKnown RBP12.11□□□□□ -0.47
SRRT-215ENST00000614484 RMDN1Q96DB5 314 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 MCRS1Q96EZ8 462 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 RBM18Q96H35 190 aaKnown RBP12.11□□□□□ -0.47
SRRT-215ENST00000614484 NSL1Q96IY1 281 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 HSFY1Q96LI6 401 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 SLITRK1Q96PX8 696 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 ECSITQ9BQ95 431 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 TUBB6Q9BUF5 446 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 HEMGNQ9BXL5 484 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 PIGVQ9NUD9 493 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 WHRNQ9P202 907 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 FBXW11Q9UKB1 542 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 TBC1D30Q9Y2I9 924 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 COQ6Q9Y2Z9 468 aa12.11□□□□□ -0.47
SRRT-215ENST00000614484 TMEM191CA6NGB0 347 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 CENPBD1B2RD01 187 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 CKMP06732 381 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 KCNA5P22460 613 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 IL1R2P27930 398 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 RCVRNP35243 200 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 ERFP50548 548 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 BCAP31P51572 246 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 KCNQ1P51787 676 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 VCPP55072 806 aaKnown RBP12.1□□□□□ -0.47
SRRT-215ENST00000614484 OLR1P78380 273 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 PDK4Q16654 411 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 SHEQ5VZ18 495 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 POTEHQ6S545 545 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 CCDC185Q8N715 623 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 ANGPTL6Q8NI99 470 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 WBP2Q969T9 261 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 ZSWIM3Q96MP5 696 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 SECISBP2Q96T21 854 aaKnown RBP12.1□□□□□ -0.47
SRRT-215ENST00000614484 IFT22Q9H7X7 185 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 NTN4Q9HB63 628 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 PRDM6Q9NQX0 595 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 FNIP2Q9P278 1114 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 STRIP2Q9ULQ0 834 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 CCL26Q9Y258 94 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.1□□□□□ -0.47
SRRT-215ENST00000614484 B8ZZF3 427 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 TK2O00142 265 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 TCEA3O75764 348 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 RHOP08100 348 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 CD48P09326 243 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 SRGAP2BP0DMP2 458 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 ITIH2P19823 946 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 GPD1P21695 349 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 DYNLT1P63172 113 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 FAPQ12884 760 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 TEAD2Q15562 447 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 TGFBIQ15582 683 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 TRIP13Q15645 432 aaPredicted RBP12.1□□□□□ -0.47
SRRT-215ENST00000614484 LRIT3Q3SXY7 679 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 TPGS2Q68CL5 300 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 B3GNT6Q6ZMB0 384 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 OTOAQ7RTW8 1153 aa12.1□□□□□ -0.47
SRRT-215ENST00000614484 PRUNE1Q86TP1 453 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms