RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 PIP5KL1Q5T9C9 394 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 PDIK1LQ8N165 341 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 FAM131CQ96AQ9 280 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 SERPINB12Q96P63 405 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 MCCC1Q96RQ3 725 aaPredicted RBP14.76□□□□□ -0.05
CD48-203ENST00000613788 LYSMD1Q96S90 227 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 FOXP3Q9BZS1 431 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 PCDH12Q9NPG4 1184 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 USP36Q9P275 1121 aaKnown RBP14.76□□□□□ -0.05
CD48-203ENST00000613788 CCDC163A0A0D9SF12 145 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 CAPN8A6NHC0 703 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 PLK4O00444 970 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 AREL1O15033 823 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 PPFIA2O75334 1257 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 SLC34A2O95436 690 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 IGLV3-19P01714 112 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 ALPIP09923 528 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 TPH1P17752 444 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 ABL2P42684 1182 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 ARL4CP56559 192 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 LAMB3Q13751 1172 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 ERCC6LQ2NKX8 1250 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 AGBL4Q5VU57 503 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 CAND1Q86VP6 1230 aaKnown RBP14.76□□□□□ -0.05
CD48-203ENST00000613788 EIF1ADQ8N9N8 165 aaKnown RBP14.76□□□□□ -0.05
CD48-203ENST00000613788 FBXO25Q8TCJ0 367 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 BRSK1Q8TDC3 778 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 IL22Q9GZX6 179 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 BTBD1Q9H0C5 482 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 TSPYL1Q9H0U9 437 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 KDM4CQ9H3R0 1056 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 SGK2Q9HBY8 427 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 PRMT8Q9NR22 394 aaPredicted RBP14.76□□□□□ -0.05
CD48-203ENST00000613788 MTRF1LQ9UGC7 380 aaKnown RBP14.76□□□□□ -0.05
CD48-203ENST00000613788 SERGEFQ9UGK8 458 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 FADS3Q9Y5Q0 445 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 SDR42E2A6NKP2 422 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 PRR33A8MZF0 331 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 AXIN1O15169 862 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 TSPAN6O43657 245 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 GPR37L1O60883 481 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 CRTAMO95727 393 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 PRKCGP05129 697 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 TUBBP07437 444 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 MCM3P25205 808 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 VIPR1P32241 457 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 PXNP49023 591 aaPredicted RBP14.75□□□□□ -0.05
CD48-203ENST00000613788 CARSP49589 748 aaKnown RBP14.75□□□□□ -0.05
CD48-203ENST00000613788 SESN2P58004 480 aaPredicted RBP14.75□□□□□ -0.05
CD48-203ENST00000613788 ARHGEF7Q14155 803 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 HIF1AQ16665 826 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 DNAJC21Q5F1R6 531 aaKnown RBP14.75□□□□□ -0.05
CD48-203ENST00000613788 LRRC73Q5JTD7 316 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 ARMC3Q5W041 872 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 ZDHHC24Q6UX98 284 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 CEP128Q6ZU80 1094 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 ZNF534Q76KX8 674 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 DPPA4Q7L190 304 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 ZCCHC9Q8N567 271 aaKnown RBP14.75□□□□□ -0.05
CD48-203ENST00000613788 GPR161Q8N6U8 529 aaKnown RBP14.75□□□□□ -0.05
CD48-203ENST00000613788 OR14C36Q8NHC7 312 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 BLOC1S5Q8TDH9 187 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 TPSD1Q9BZJ3 242 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 ANKZF1Q9H8Y5 726 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 ZDHHC18Q9NUE0 388 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 PIH1D1Q9NWS0 290 aaKnown RBP14.75□□□□□ -0.05
CD48-203ENST00000613788 B4GALT6Q9UBX8 382 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.75□□□□□ -0.05
CD48-203ENST00000613788 FBXO4Q9UKT5 387 aa14.75□□□□□ -0.05
CD48-203ENST00000613788 V9GYY5 206 aaPredicted RBP14.75□□□□□ -0.05
CD48-203ENST00000613788 TTC28Q96AY4 2481 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 MAGEB16A2A368 324 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 NPIPB15A6NHN6 443 aaPredicted RBP14.74□□□□□ -0.05
CD48-203ENST00000613788 C2orf81A6NN90 581 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 H0Y858 1186 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 PLRG1O43660 514 aaKnown RBP14.74□□□□□ -0.05
CD48-203ENST00000613788 AVILO75366 819 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 PIRTP0C851 137 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 ZNF30P17039 623 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 ADRA1DP25100 572 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 MMP12P39900 470 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 MAGEA3P43357 314 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 PDE1BQ01064 536 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 MSLNQ13421 630 aaPredicted RBP14.74□□□□□ -0.05
CD48-203ENST00000613788 POU6F1Q14863 301 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 TAF1AQ15573 450 aaPredicted RBP14.74□□□□□ -0.05
CD48-203ENST00000613788 TMEM52BQ4KMG9 183 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 USP39Q53GS9 565 aaKnown RBP14.74□□□□□ -0.05
CD48-203ENST00000613788 PCID2Q5JVF3 399 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 CERCAMQ5T4B2 595 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 NEK5Q6P3R8 708 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 CRTC1Q6UUV9 634 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 CENPUQ71F23 418 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 GLT6D1Q7Z4J2 308 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 FAM124AQ86V42 546 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 GPR63Q9BZJ6 419 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 EPC1Q9H2F5 836 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 ZFYVE1Q9HBF4 777 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 PREBQ9HCU5 417 aa14.74□□□□□ -0.05
CD48-203ENST00000613788 CYP8B1Q9UNU6 501 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms