RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 CLCN1P35523 988 aa17.31■□□□□ 0.36
CSNK1E-215ENST00000612795 LIG3P49916 1009 aa17.31■□□□□ 0.36
CSNK1E-215ENST00000612795 KIAA1024LP59773 190 aa17.31■□□□□ 0.36
CSNK1E-215ENST00000612795 B4GALNT1Q00973 533 aa17.31■□□□□ 0.36
CSNK1E-215ENST00000612795 NRG1Q02297 640 aaPredicted RBP17.31■□□□□ 0.36
CSNK1E-215ENST00000612795 C2CD6Q53TS8 623 aa17.31■□□□□ 0.36
CSNK1E-215ENST00000612795 BNIPLQ7Z465 357 aa17.31■□□□□ 0.36
CSNK1E-215ENST00000612795 CACNA2D3Q8IZS8 1091 aa17.31■□□□□ 0.36
CSNK1E-215ENST00000612795 PMEPA1Q969W9 287 aa17.31■□□□□ 0.36
CSNK1E-215ENST00000612795 CCDC74BQ96LY2 380 aa17.31■□□□□ 0.36
CSNK1E-215ENST00000612795 NUDT22Q9BRQ3 303 aa17.31■□□□□ 0.36
CSNK1E-215ENST00000612795 CDH19Q9H159 772 aa17.31■□□□□ 0.36
CSNK1E-215ENST00000612795 PCDH12Q9NPG4 1184 aa17.31■□□□□ 0.36
CSNK1E-215ENST00000612795 DNAJC12Q9UKB3 198 aa17.31■□□□□ 0.36
CSNK1E-215ENST00000612795 AJAP1Q9UKB5 411 aaPredicted RBP17.31■□□□□ 0.36
CSNK1E-215ENST00000612795 MFHAS1Q9Y4C4 1052 aa17.31■□□□□ 0.36
CSNK1E-215ENST00000612795 DAAM1Q9Y4D1 1078 aa17.31■□□□□ 0.36
CSNK1E-215ENST00000612795 BIN1O00499 593 aa17.3■□□□□ 0.36
CSNK1E-215ENST00000612795 INSIG1O15503 277 aa17.3■□□□□ 0.36
CSNK1E-215ENST00000612795 BMP6P22004 513 aa17.3■□□□□ 0.36
CSNK1E-215ENST00000612795 PON1P27169 355 aa17.3■□□□□ 0.36
CSNK1E-215ENST00000612795 CDH5P33151 784 aaPredicted RBP17.3■□□□□ 0.36
CSNK1E-215ENST00000612795 ARSDP51689 593 aa17.3■□□□□ 0.36
CSNK1E-215ENST00000612795 MAZP56270 477 aaKnown RBP17.3■□□□□ 0.36
CSNK1E-215ENST00000612795 OR1D5P58170 312 aa17.3■□□□□ 0.36
CSNK1E-215ENST00000612795 BPIFB4P59827 614 aa17.3■□□□□ 0.36
CSNK1E-215ENST00000612795 AGERQ15109 404 aa17.3■□□□□ 0.36
CSNK1E-215ENST00000612795 UGP2Q16851 508 aa17.3■□□□□ 0.36
CSNK1E-215ENST00000612795 EMC1Q8N766 993 aa17.3■□□□□ 0.36
CSNK1E-215ENST00000612795 PLA2G15Q8NCC3 412 aa17.3■□□□□ 0.36
CSNK1E-215ENST00000612795 ART4Q93070 314 aa17.3■□□□□ 0.36
CSNK1E-215ENST00000612795 FUBP1Q96AE4 644 aaKnown RBP17.3■□□□□ 0.36
CSNK1E-215ENST00000612795 PSMG3-AS1Q96PY0 264 aa17.3■□□□□ 0.36
CSNK1E-215ENST00000612795 ZMYND15Q9H091 742 aa17.3■□□□□ 0.36
CSNK1E-215ENST00000612795 LRRC4CQ9HCJ2 640 aa17.3■□□□□ 0.36
CSNK1E-215ENST00000612795 CYP4F12Q9HCS2 524 aa17.3■□□□□ 0.36
CSNK1E-215ENST00000612795 METTL5Q9NRN9 209 aaKnown RBP17.3■□□□□ 0.36
CSNK1E-215ENST00000612795 PCDHGA3Q9Y5H0 932 aa17.3■□□□□ 0.36
CSNK1E-215ENST00000612795 IGHV5-10-1A0A0J9YXX1 117 aa17.29■□□□□ 0.36
CSNK1E-215ENST00000612795 FOXN3O00409 490 aaPredicted RBP17.29■□□□□ 0.36
CSNK1E-215ENST00000612795 B4GAT1O43505 415 aa17.29■□□□□ 0.36
CSNK1E-215ENST00000612795 LRIG2O94898 1065 aa17.29■□□□□ 0.36
CSNK1E-215ENST00000612795 FGF3P11487 239 aaPredicted RBP17.29■□□□□ 0.36
CSNK1E-215ENST00000612795 ADRA1BP35368 520 aa17.29■□□□□ 0.36
CSNK1E-215ENST00000612795 MMP12P39900 470 aa17.29■□□□□ 0.36
CSNK1E-215ENST00000612795 GRM3Q14832 879 aa17.29■□□□□ 0.36
CSNK1E-215ENST00000612795 CLPPQ16740 277 aaPredicted RBP17.29■□□□□ 0.36
CSNK1E-215ENST00000612795 TSR1Q2NL82 804 aaKnown RBP17.29■□□□□ 0.36
CSNK1E-215ENST00000612795 INO80DQ53TQ3 878 aaPredicted RBP17.29■□□□□ 0.36
CSNK1E-215ENST00000612795 SMYD5Q6GMV2 418 aa17.29■□□□□ 0.36
CSNK1E-215ENST00000612795 DNAAF5Q86Y56 855 aa17.29■□□□□ 0.36
CSNK1E-215ENST00000612795 AGBL5Q8NDL9 886 aa17.29■□□□□ 0.36
CSNK1E-215ENST00000612795 CCL4L1Q8NHW4 92 aa17.29■□□□□ 0.36
CSNK1E-215ENST00000612795 SUDS3Q9H7L9 328 aaPredicted RBP17.29■□□□□ 0.36
CSNK1E-215ENST00000612795 TMEM59LQ9UK28 342 aa17.29■□□□□ 0.36
CSNK1E-215ENST00000612795 NEU3Q9UQ49 428 aa17.29■□□□□ 0.36
CSNK1E-215ENST00000612795 PLAAQ9Y263 795 aa17.29■□□□□ 0.36
CSNK1E-215ENST00000612795 ATP8A1Q9Y2Q0 1164 aa17.29■□□□□ 0.36
CSNK1E-215ENST00000612795 B3GALT1Q9Y5Z6 326 aa17.29■□□□□ 0.36
CSNK1E-215ENST00000612795 ICE1Q9Y2F5 2266 aa17.29■□□□□ 0.36
CSNK1E-215ENST00000612795 MYO9AB2RTY4 2548 aa17.28■□□□□ 0.36
CSNK1E-215ENST00000612795 TSPAN11A1L157 253 aa17.28■□□□□ 0.36
CSNK1E-215ENST00000612795 GTPBP10A4D1E9 387 aaKnown RBP17.28■□□□□ 0.36
CSNK1E-215ENST00000612795 FAM72CH0Y354 149 aa17.28■□□□□ 0.36
CSNK1E-215ENST00000612795 TNFRSF10CO14798 259 aa17.28■□□□□ 0.36
CSNK1E-215ENST00000612795 CAPN5O15484 640 aaPredicted RBP17.28■□□□□ 0.36
CSNK1E-215ENST00000612795 RAD1O60671 282 aa17.28■□□□□ 0.36
CSNK1E-215ENST00000612795 PRKAR1AP10644 381 aa17.28■□□□□ 0.36
CSNK1E-215ENST00000612795 CSTF2P33240 577 aaKnown RBP eCLIP17.28■□□□□ 0.36
CSNK1E-215ENST00000612795 TRA2AQ13595 282 aaKnown RBP eCLIP17.28■□□□□ 0.36
CSNK1E-215ENST00000612795 RAB6CQ53S08 254 aa17.28■□□□□ 0.36
CSNK1E-215ENST00000612795 FAM72AQ5TYM5 149 aa17.28■□□□□ 0.36
CSNK1E-215ENST00000612795 TAF3Q5VWG9 929 aa17.28■□□□□ 0.36
CSNK1E-215ENST00000612795 FAM72DQ6L9T8 149 aa17.28■□□□□ 0.36
CSNK1E-215ENST00000612795 ATCAYQ86WG3 371 aa17.28■□□□□ 0.36
CSNK1E-215ENST00000612795 FAM72BQ86X60 149 aa17.28■□□□□ 0.36
CSNK1E-215ENST00000612795 PAF1Q8N7H5 531 aa17.28■□□□□ 0.36
CSNK1E-215ENST00000612795 HCAR2Q8TDS4 363 aa17.28■□□□□ 0.36
CSNK1E-215ENST00000612795 KIAA1143Q96AT1 154 aaPredicted RBP17.28■□□□□ 0.36
CSNK1E-215ENST00000612795 DDA1Q9BW61 102 aa17.28■□□□□ 0.36
CSNK1E-215ENST00000612795 RAB6CQ9H0N0 254 aa17.28■□□□□ 0.36
CSNK1E-215ENST00000612795 SUV39H2Q9H5I1 410 aa17.28■□□□□ 0.36
CSNK1E-215ENST00000612795 WDR26Q9H7D7 661 aa17.28■□□□□ 0.36
CSNK1E-215ENST00000612795 PRSS38A1L453 326 aa17.27■□□□□ 0.36
CSNK1E-215ENST00000612795 PRKCGP05129 697 aa17.27■□□□□ 0.36
CSNK1E-215ENST00000612795 PLEKP08567 350 aaPredicted RBP17.27■□□□□ 0.36
CSNK1E-215ENST00000612795 SDC4P31431 198 aa17.27■□□□□ 0.36
CSNK1E-215ENST00000612795 LIMK2P53671 638 aa17.27■□□□□ 0.36
CSNK1E-215ENST00000612795 C15orf59Q2T9L4 293 aaPredicted RBP17.27■□□□□ 0.36
CSNK1E-215ENST00000612795 BRAT1Q6PJG6 821 aa17.27■□□□□ 0.36
CSNK1E-215ENST00000612795 ZNF438Q7Z4V0 828 aa17.27■□□□□ 0.36
CSNK1E-215ENST00000612795 FAM129CQ86XR2 697 aa17.27■□□□□ 0.36
CSNK1E-215ENST00000612795 FAM71AQ8IYT1 594 aa17.27■□□□□ 0.36
CSNK1E-215ENST00000612795 NRSN1Q8IZ57 195 aa17.27■□□□□ 0.36
CSNK1E-215ENST00000612795 ZDHHC1Q8WTX9 485 aa17.27■□□□□ 0.36
CSNK1E-215ENST00000612795 GSDMCQ9BYG8 508 aa17.27■□□□□ 0.36
CSNK1E-215ENST00000612795 ASPSCR1Q9BZE9 553 aa17.27■□□□□ 0.36
CSNK1E-215ENST00000612795 GPN2Q9H9Y4 310 aaPredicted RBP17.27■□□□□ 0.36
CSNK1E-215ENST00000612795 CARS2Q9HA77 564 aaKnown RBP17.27■□□□□ 0.36
CSNK1E-215ENST00000612795 SIX2Q9NPC8 291 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms