RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 PCNX2A6NKB5 2137 aa19.32■□□□□ 0.68
SRSF4-206ENST00000605204 SPTY2D1-AS1A0A0U1RR47 76 aa19.32■□□□□ 0.68
SRSF4-206ENST00000605204 CCDC66A2RUB6 948 aa19.32■□□□□ 0.68
SRSF4-206ENST00000605204 H3BM21 787 aa19.32■□□□□ 0.68
SRSF4-206ENST00000605204 KCNK3O14649 394 aa19.32■□□□□ 0.68
SRSF4-206ENST00000605204 RAD51BO15315 384 aa19.32■□□□□ 0.68
SRSF4-206ENST00000605204 MTSS1O43312 755 aa19.32■□□□□ 0.68
SRSF4-206ENST00000605204 PGLSO95336 258 aa19.32■□□□□ 0.68
SRSF4-206ENST00000605204 ELFN1P0C7U0 828 aa19.32■□□□□ 0.68
SRSF4-206ENST00000605204 CTNNA1P35221 906 aaKnown RBP19.32■□□□□ 0.68
SRSF4-206ENST00000605204 LIG3P49916 1009 aa19.32■□□□□ 0.68
SRSF4-206ENST00000605204 MAXP61244 160 aa19.32■□□□□ 0.68
SRSF4-206ENST00000605204 RPL26P61254 145 aaKnown RBP19.32■□□□□ 0.68
SRSF4-206ENST00000605204 FAM193AP78312 1265 aa19.32■□□□□ 0.68
SRSF4-206ENST00000605204 ITKQ08881 620 aa19.32■□□□□ 0.68
SRSF4-206ENST00000605204 SLC10A2Q12908 348 aaPredicted RBP19.32■□□□□ 0.68
SRSF4-206ENST00000605204 SHBQ15464 509 aa19.32■□□□□ 0.68
SRSF4-206ENST00000605204 SPOCD1Q6ZMY3 1216 aa19.32■□□□□ 0.68
SRSF4-206ENST00000605204 SYCE1Q8N0S2 351 aa19.32■□□□□ 0.68
SRSF4-206ENST00000605204 CCDC112Q8NEF3 446 aa19.32■□□□□ 0.68
SRSF4-206ENST00000605204 KIAA1524Q8TCG1 905 aa19.32■□□□□ 0.68
SRSF4-206ENST00000605204 KLK13Q9UKR3 277 aa19.32■□□□□ 0.68
SRSF4-206ENST00000605204 RPL26L1Q9UNX3 145 aaKnown RBP19.32■□□□□ 0.68
SRSF4-206ENST00000605204 EFR3BQ9Y2G0 817 aa19.32■□□□□ 0.68
SRSF4-206ENST00000605204 PCDHGC4Q9Y5F7 938 aa19.32■□□□□ 0.68
SRSF4-206ENST00000605204 RCCD1A6NED2 376 aa19.31■□□□□ 0.68
SRSF4-206ENST00000605204 POM121BA6NF01 834 aa19.31■□□□□ 0.68
SRSF4-206ENST00000605204 PSMD11O00231 422 aa19.31■□□□□ 0.68
SRSF4-206ENST00000605204 TNFSF14O43557 240 aa19.31■□□□□ 0.68
SRSF4-206ENST00000605204 LZTS3O60299 673 aaPredicted RBP19.31■□□□□ 0.68
SRSF4-206ENST00000605204 MAP3K6O95382 1288 aa19.31■□□□□ 0.68
SRSF4-206ENST00000605204 CYP2A6P11509 494 aaPredicted RBP19.31■□□□□ 0.68
SRSF4-206ENST00000605204 HOXB3P14651 431 aaPredicted RBP19.31■□□□□ 0.68
SRSF4-206ENST00000605204 CETN2P41208 172 aa19.31■□□□□ 0.68
SRSF4-206ENST00000605204 PEX5P50542 639 aa19.31■□□□□ 0.68
SRSF4-206ENST00000605204 THOP1P52888 689 aa19.31■□□□□ 0.68
SRSF4-206ENST00000605204 HNRNPKP61978 463 aaKnown RBP eCLIP19.31■□□□□ 0.68
SRSF4-206ENST00000605204 SLC22A18ASQ8N1D0 253 aa19.31■□□□□ 0.68
SRSF4-206ENST00000605204 TP53I13Q8NBR0 393 aaPredicted RBP19.31■□□□□ 0.68
SRSF4-206ENST00000605204 ACRBPQ8NEB7 543 aa19.31■□□□□ 0.68
SRSF4-206ENST00000605204 ATL2Q8NHH9 583 aa19.31■□□□□ 0.68
SRSF4-206ENST00000605204 PDCD6IPQ8WUM4 868 aaKnown RBP19.31■□□□□ 0.68
SRSF4-206ENST00000605204 CAMK1GQ96NX5 476 aa19.31■□□□□ 0.68
SRSF4-206ENST00000605204 MCCC1Q96RQ3 725 aaPredicted RBP19.31■□□□□ 0.68
SRSF4-206ENST00000605204 IL12RB2Q99665 862 aa19.31■□□□□ 0.68
SRSF4-206ENST00000605204 FTSJ1Q9UET6 329 aa19.31■□□□□ 0.68
SRSF4-206ENST00000605204 TFR2Q9UP52 801 aa19.31■□□□□ 0.68
SRSF4-206ENST00000605204 PPIL1Q9Y3C6 166 aa19.31■□□□□ 0.68
SRSF4-206ENST00000605204 NBEAQ8NFP9 2946 aa19.3■□□□□ 0.68
SRSF4-206ENST00000605204 LOC400499M0QZD8 3231 aa19.3■□□□□ 0.68
SRSF4-206ENST00000605204 ITPR1Q14643 2758 aa19.3■□□□□ 0.68
SRSF4-206ENST00000605204 BAHCC1Q9P281 2608 aa19.3■□□□□ 0.68
SRSF4-206ENST00000605204 CST8O60676 142 aa19.3■□□□□ 0.68
SRSF4-206ENST00000605204 NME1P15531 152 aaKnown RBP19.3■□□□□ 0.68
SRSF4-206ENST00000605204 IGFALSP35858 605 aa19.3■□□□□ 0.68
SRSF4-206ENST00000605204 IL9RQ01113 521 aa19.3■□□□□ 0.68
SRSF4-206ENST00000605204 TRAF2Q12933 501 aa19.3■□□□□ 0.68
SRSF4-206ENST00000605204 RALGDSQ12967 914 aa19.3■□□□□ 0.68
SRSF4-206ENST00000605204 MTM1Q13496 603 aa19.3■□□□□ 0.68
SRSF4-206ENST00000605204 HS1BP3Q53T59 392 aa19.3■□□□□ 0.68
SRSF4-206ENST00000605204 CCDC50Q8IVM0 306 aa19.3■□□□□ 0.68
SRSF4-206ENST00000605204 ZCCHC14Q8WYQ9 949 aaKnown RBP19.3■□□□□ 0.68
SRSF4-206ENST00000605204 P3H4Q92791 437 aa19.3■□□□□ 0.68
SRSF4-206ENST00000605204 SCRN2Q96FV2 425 aa19.3■□□□□ 0.68
SRSF4-206ENST00000605204 TBATAQ96M53 351 aa19.3■□□□□ 0.68
SRSF4-206ENST00000605204 LGMNQ99538 433 aa19.3■□□□□ 0.68
SRSF4-206ENST00000605204 TSGA10Q9BZW7 698 aa19.3■□□□□ 0.68
SRSF4-206ENST00000605204 LACRTQ9GZZ8 138 aa19.3■□□□□ 0.68
SRSF4-206ENST00000605204 GOLPH3Q9H4A6 298 aa19.3■□□□□ 0.68
SRSF4-206ENST00000605204 SALL4Q9UJQ4 1053 aa19.3■□□□□ 0.68
SRSF4-206ENST00000605204 TTLL3Q9Y4R7 772 aa19.3■□□□□ 0.68
SRSF4-206ENST00000605204 PCDHA3Q9Y5H8 950 aa19.3■□□□□ 0.68
SRSF4-206ENST00000605204 RAI2Q9Y5P3 530 aa19.3■□□□□ 0.68
SRSF4-206ENST00000605204 LAMA5O15230 3695 aa19.29■□□□□ 0.68
SRSF4-206ENST00000605204 hCG_1818297A0A087WSY0 165 aa19.29■□□□□ 0.68
SRSF4-206ENST00000605204 NEMP2A6NFY4 417 aa19.29■□□□□ 0.68
SRSF4-206ENST00000605204 KCNK1O00180 336 aa19.29■□□□□ 0.68
SRSF4-206ENST00000605204 FZD6O60353 706 aa19.29■□□□□ 0.68
SRSF4-206ENST00000605204 ZNF189O75820 626 aaPredicted RBP19.29■□□□□ 0.68
SRSF4-206ENST00000605204 CSF2P04141 144 aa19.29■□□□□ 0.68
SRSF4-206ENST00000605204 HLA-DQB2P05538 268 aa19.29■□□□□ 0.68
SRSF4-206ENST00000605204 CDK4P11802 303 aa19.29■□□□□ 0.68
SRSF4-206ENST00000605204 ITIH2P19823 946 aa19.29■□□□□ 0.68
SRSF4-206ENST00000605204 CTNNA2P26232 953 aa19.29■□□□□ 0.68
SRSF4-206ENST00000605204 HTR1BP28222 390 aa19.29■□□□□ 0.68
SRSF4-206ENST00000605204 VIPR1P32241 457 aa19.29■□□□□ 0.68
SRSF4-206ENST00000605204 DYNLT1P63172 113 aa19.29■□□□□ 0.68
SRSF4-206ENST00000605204 AP1B1Q10567 949 aa19.29■□□□□ 0.68
SRSF4-206ENST00000605204 PDE1CQ14123 709 aaPredicted RBP19.29■□□□□ 0.68
SRSF4-206ENST00000605204 IRF4Q15306 451 aa19.29■□□□□ 0.68
SRSF4-206ENST00000605204 SLC14A2Q15849 920 aa19.29■□□□□ 0.68
SRSF4-206ENST00000605204 PRAMEF14Q5SWL7 426 aa19.29■□□□□ 0.68
SRSF4-206ENST00000605204 LIPIQ6XZB0 460 aa19.29■□□□□ 0.68
SRSF4-206ENST00000605204 MACC1Q6ZN28 852 aa19.29■□□□□ 0.68
SRSF4-206ENST00000605204 RAVER1Q8IY67 606 aaKnown RBP19.29■□□□□ 0.68
SRSF4-206ENST00000605204 BTN2A2Q8WVV5 523 aa19.29■□□□□ 0.68
SRSF4-206ENST00000605204 TDRD1Q9BXT4 1180 aaKnown RBP19.29■□□□□ 0.68
SRSF4-206ENST00000605204 B4GALT6Q9UBX8 382 aa19.29■□□□□ 0.68
SRSF4-206ENST00000605204 ATRXP46100 2492 aa19.28■□□□□ 0.68
SRSF4-206ENST00000605204 MIF4GDA9UHW6 222 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms