RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 TIMM13Q9Y5L4 95 aaPredicted RBP9.64□□□□□ -0.87
CSMD1-217ENST00000602723 UMODL1Q5DID0 1318 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 H3BRB1 525 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 AVILO75366 819 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 UGT2B17O75795 530 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 INSRRP14616 1297 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 LYPLAL1Q5VWZ2 237 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 NPNTQ6UXI9 565 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 IQCF2Q8IXL9 164 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 C2orf49Q9BVC5 232 aaPredicted RBP9.64□□□□□ -0.87
CSMD1-217ENST00000602723 TUT1Q9H6E5 874 aaKnown RBP9.64□□□□□ -0.87
CSMD1-217ENST00000602723 ACSS3Q9H6R3 686 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 BTRCQ9Y297 605 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 TELO2Q9Y4R8 837 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 NFASCO94856 1347 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 PCP4L1A6NKN8 68 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 GALK1P51570 392 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 AADACL2Q6P093 401 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 UNC5AQ6ZN44 842 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 FAM47BQ8NA70 645 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 ERLEC1Q96DZ1 483 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 CLCC1Q96S66 551 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 RAP2CQ9Y3L5 183 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 ITGA2BP08514 1039 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 HNRNPLP14866 589 aaKnown RBP eCLIP9.64□□□□□ -0.872e-7■■■■□ 19.3
CSMD1-217ENST00000602723 MYBPC3Q14896 1274 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 PLET1Q6UQ28 207 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 C16orf59Q7L2K0 433 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 C10orf107Q8IVU9 208 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 TBC1D21Q8IYX1 336 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 PPP1R16AQ96I34 528 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 KCND1Q9NSA2 647 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 SNX7Q9UNH6 387 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 PLK4O00444 970 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 PRODHO43272 600 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 TSHRP16473 764 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 RFX5P48382 616 aaPredicted RBP9.64□□□□□ -0.87
CSMD1-217ENST00000602723 FBXL19Q6PCT2 694 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 PTCD2Q8WV60 388 aaKnown RBP9.64□□□□□ -0.87
CSMD1-217ENST00000602723 PANX1Q96RD7 426 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 FAM129BQ96TA1 746 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 FAM86B1E9PN63 330 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 CASKO14936 926 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 PEX11AO75192 247 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 MTHFRP42898 656 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 SLC39A12Q504Y0 691 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 AMIGO2Q86SJ2 522 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 TCAIMQ8N3R3 496 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 PCSK9Q8NBP7 692 aaKnown RBP9.64□□□□□ -0.87
CSMD1-217ENST00000602723 DNERQ8NFT8 737 aa9.64□□□□□ -0.87
CSMD1-217ENST00000602723 RBM4BQ9BQ04 359 aaKnown RBP9.64□□□□□ -0.87
CSMD1-217ENST00000602723 RBM4Q9BWF3 364 aaKnown RBP9.64□□□□□ -0.87
CSMD1-217ENST00000602723 LTN1O94822 1766 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 SNRNP200O75643 2136 aaKnown RBP9.63□□□□□ -0.87
CSMD1-217ENST00000602723 CCNKO75909 580 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 ZBTB11O95625 1053 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-217ENST00000602723 BDNFP23560 247 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 SULT1C3Q6IMI6 304 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 ASB7Q9H672 318 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 SETD4Q9NVD3 440 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 PACSIN3Q9UKS6 424 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 POLR3HQ9Y535 204 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-217ENST00000602723 UGT2B11O75310 529 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 SCGNO76038 276 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 IFNGP01579 166 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 BMP7P18075 431 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 CBFBQ13951 182 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 NTRK3Q16288 839 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 APTXQ7Z2E3 356 aaKnown RBP9.63□□□□□ -0.87
CSMD1-217ENST00000602723 SYTL5Q8TDW5 730 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-217ENST00000602723 DUSP9Q99956 384 aaKnown RBP9.63□□□□□ -0.87
CSMD1-217ENST00000602723 ATP13A3Q9H7F0 1226 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 FAM172BPA6NC97 362 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 AZIN1O14977 448 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 C9P02748 559 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 TFEBP19484 476 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 TNFAIP8L3Q5GJ75 292 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 WNT8BQ93098 351 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 MAT2BQ9NZL9 334 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 RBMXL2O75526 392 aaKnown RBP9.63□□□□□ -0.87
CSMD1-217ENST00000602723 NUDT17P0C025 328 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 C15orf59Q2T9L4 293 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-217ENST00000602723 LSM12Q3MHD2 195 aaKnown RBP9.63□□□□□ -0.87
CSMD1-217ENST00000602723 SAMD7Q7Z3H4 446 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 OAFQ86UD1 273 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 COLGALT2Q8IYK4 626 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 FER1L6Q2WGJ9 1857 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 SLC28A2O43868 658 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 TRIM3O75382 744 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-217ENST00000602723 KRT33AO76009 404 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 DHFRP00374 187 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 GABRB2P47870 512 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 VBP1P61758 197 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 LRRC38Q5VT99 294 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 LLGL2Q6P1M3 1020 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 SLC27A1Q6PCB7 646 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 FAM183BPQ6ZVS7 135 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 KBTBD7Q8WVZ9 684 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 FCRL4Q96PJ5 515 aa9.63□□□□□ -0.87
CSMD1-217ENST00000602723 PRDM8Q9NQV8 689 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms